RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 K7ERI5 159 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 EI24O14681 340 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PI15O43692 258 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 SEMA4FO95754 770 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 IGHV3-13P01766 116 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 CYP11B1P15538 503 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 FUT1P19526 365 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 UCP1P25874 307 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PTPN6P29350 595 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 GPC3P51654 580 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 SLC7A2P52569 658 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 HTD2P86397 168 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 NAAAQ02083 359 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 FUT7Q11130 342 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 DPYSQ14117 519 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ZKSCAN8Q15776 578 aaPredicted RBP2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PCK2Q16822 640 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PARP6Q2NL67 630 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF699Q32M78 642 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 LRIT3Q3SXY7 679 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 VWA2Q5GFL6 755 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 LDLRAP1Q5SW96 308 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ARMCX5Q6P1M9 558 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ATRAIDQ6UW56 229 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ABRAXAS1Q6UWZ7 409 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 UNC5DQ6UXZ4 953 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PAQR9Q6ZVX9 377 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 SLC47A2Q86VL8 602 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 VPS36Q86VN1 386 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ERC1Q8IUD2 1116 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 LRRC49Q8IUZ0 686 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 CSNK1G2-AS1Q8NCQ2 148 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 WDR36Q8NI36 951 aaKnown RBP2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 FLVCR1-AS1Q8TAF5 88 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 RASL10AQ92737 203 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 TAF4BQ92750 862 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 BIRC7Q96CA5 298 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 NTNG2Q96CW9 530 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF414Q96IQ9 312 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 TSPAN18Q96SJ8 248 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 TRIM6Q9C030 488 aaPredicted RBP2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ADNPQ9H2P0 1102 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 ALG9Q9H6U8 611 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 TAS2R3Q9NYW6 316 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PAK5Q9P286 719 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 PURGQ9UJV8 347 aaKnown RBP2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 A0A0J9YVX5 310 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ACOD1A6NK06 481 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 FOXI3A8MTJ6 420 aaPredicted RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 SHISA9B4DS77 424 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 E9PMD0 336 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 SGK494L7N484 410 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 LGALS8O00214 317 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 MCF2LO15068 1137 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 RANBP6O60518 1105 aaKnown RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 PDE5AO76074 875 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 NDUFA7O95182 113 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ECDO95905 644 aaPredicted RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 MT-ND1P03886 318 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 HOXD4P09016 255 aaPredicted RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 HSD17B1P14061 328 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 IL4RP24394 825 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 SAA4P35542 130 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 VCPP55072 806 aaKnown RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 HERVK_113P63132 956 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ERVK-8P63133 956 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 BNIP1Q12981 228 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 TMEM44Q2T9K0 475 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF506Q5JVG8 444 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 LINC00242Q5T6M2 205 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 TAF3Q5VWG9 929 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 RFWD3Q6PCD5 774 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 APOOLQ6UXV4 268 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 STOX1Q6ZVD7 989 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 GET4Q7L5D6 327 aaPredicted RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 CATSPER4Q7RTX7 472 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 TIPARPQ7Z3E1 657 aaKnown RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 CERS5Q8N5B7 392 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 BCORP1Q8N888 145 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF491Q8N8L2 437 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 OR4Q3Q8NH05 313 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 LHX4Q969G2 390 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 TBC1D31Q96DN5 1066 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 RBM18Q96H35 190 aaKnown RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 SOSTQ9BQB4 213 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 FAM173AQ9BQD7 235 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 APOOQ9BUR5 198 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ERVK-6Q9BXR3 956 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ECT2Q9H8V3 914 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 GNB4Q9HAV0 340 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ABCC13Q9NSE7 274 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF446Q9NWS9 450 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 MLXQ9UH92 298 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 FZR1Q9UM11 496 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 KLF2Q9Y5W3 355 aaPredicted RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 FKBP7Q9Y680 259 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 STYXL1Q9Y6J8 313 aa2.81□□□□□ -1.96
SNRNP27-204ENST00000487029 NCAPD2Q15021 1401 aa2.8□□□□□ -1.96
SNRNP27-204ENST00000487029 ABCC4O15439 1325 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms