RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 METTL7AQ9H8H3 244 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 ANKRA2Q9H9E1 313 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 UTS2RQ9UKP6 389 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 CFL2Q9Y281 166 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 L3MBTL1Q9Y468 752 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 ARHGAP21Q5T5U3 1957 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 HSPB2A8KAH6 182 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 AHRRA9YTQ3 701 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 FAM47E-STBD1D6RA91 191 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 RIPK2O43353 540 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 NME6O75414 186 aaPredicted RBP22.43■■□□□ 1.18
LIME1-206ENST00000487026 EPPINO95925 133 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 IMPDH1P20839 514 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 HTR6P50406 440 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 TRA2BP62995 288 aaKnown RBP22.43■■□□□ 1.18
LIME1-206ENST00000487026 RAE1P78406 368 aaKnown RBP22.43■■□□□ 1.18
LIME1-206ENST00000487026 HSPB2Q16082 182 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 ACSF3Q4G176 576 aaPredicted RBP22.43■■□□□ 1.18
LIME1-206ENST00000487026 TIGD3Q6B0B8 471 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 VASNQ6EMK4 673 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 ARSKQ6UWY0 536 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 ANGPTL8Q6UXH0 198 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 CCDC116Q8IYX3 515 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 NRGNQ92686 78 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 NTNG2Q96CW9 530 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 MTBPQ96DY7 904 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 HSPBAP1Q96EW2 488 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 TMEM41AQ96HV5 264 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 ZNF382Q96SR6 550 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 PFDN4Q9NQP4 134 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 CAMK2AQ9UQM7 478 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 DLGAP4Q9Y2H0 992 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 EXPH5Q8NEV8 1989 aa22.43■■□□□ 1.18
LIME1-206ENST00000487026 ULK1O75385 1050 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 IL3P08700 152 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 FAM153BP0C7A2 387 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 NAGAP17050 411 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 BMP7P18075 431 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 BMP5P22003 454 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 ATP5F1P24539 256 aaPredicted RBP22.42■■□□□ 1.18
LIME1-206ENST00000487026 PTPN6P29350 595 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 HMOX2P30519 316 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 EMDP50402 254 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 PLCXD2Q0VAA5 305 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 CSTF3Q12996 717 aaKnown RBP22.42■■□□□ 1.18
LIME1-206ENST00000487026 FAM153CQ494X1 144 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 DCST1Q5T197 706 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 SCIMPQ6UWF3 145 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 TRMT10CQ7L0Y3 403 aaKnown RBP22.42■■□□□ 1.18
LIME1-206ENST00000487026 NUP54Q7Z3B4 507 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 YRDCQ86U90 279 aaKnown RBP22.42■■□□□ 1.18
LIME1-206ENST00000487026 OR1J4Q8NGS1 313 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 KCNA7Q96RP8 456 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 UGT2B28Q9BY64 529 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 ACPTQ9BZG2 426 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 GALNT9Q9HCQ5 603 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 MCM8Q9UJA3 840 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 TIMM22Q9Y584 194 aa22.42■■□□□ 1.18
LIME1-206ENST00000487026 ICOSLGO75144 302 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 UGT2B11O75310 529 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 ZWINTO95229 277 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 HSD3B1P14060 373 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 HSD3B2P26439 372 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 UQCRC1P31930 480 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 PTGDSP41222 190 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 HMGCS1Q01581 520 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 BTKQ06187 659 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 SLC29A2Q14542 456 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 IFT20Q8IY31 132 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 ZZZ3Q8IYH5 903 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 RELL2Q8NC24 303 aaPredicted RBP22.41■■□□□ 1.18
LIME1-206ENST00000487026 KAT2AQ92830 837 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 EXOSC8Q96B26 276 aaKnown RBP22.41■■□□□ 1.18
LIME1-206ENST00000487026 APIPQ96GX9 242 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 PRDM14Q9GZV8 571 aa22.41■■□□□ 1.18
LIME1-206ENST00000487026 GNG14A0A1W2PPG7 69 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 PCDH7O60245 1069 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 PYGBP11216 843 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 CEACAM8P31997 349 aaPredicted RBP22.4■■□□□ 1.18
LIME1-206ENST00000487026 PPICP45877 212 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 PRKAA2P54646 552 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 NAGLUP54802 743 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 FAM83FQ8NEG4 500 aaPredicted RBP22.4■■□□□ 1.18
LIME1-206ENST00000487026 C16orf78Q8WTQ4 265 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 ABTB1Q969K4 478 aaPredicted RBP22.4■■□□□ 1.18
LIME1-206ENST00000487026 WDYHV1Q96HA8 205 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 TRIB1Q96RU8 372 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 SLC24A3Q9HC58 644 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 KLRF1Q9NZS2 232 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 PRODH2Q9UF12 536 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 TBK1Q9UHD2 729 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 MAPRE3Q9UPY8 281 aa22.4■■□□□ 1.18
LIME1-206ENST00000487026 MED12Q93074 2177 aa22.39■■□□□ 1.18
LIME1-206ENST00000487026 SYT5O00445 386 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 ACOX3O15254 700 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 RHOXF2BP0C7M4 288 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 DRD5P21918 477 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 ZNF628Q5EBL2 1059 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 NHSL2Q5HYW2 709 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 SLC30A6Q6NXT4 461 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms