RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 COLGALT1Q8NBJ5 622 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 PHYHIPQ92561 330 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 DTNBP1Q96EV8 351 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 CHMP4BQ9H444 224 aaKnown RBP5.55□□□□□ -1.52
UBR3-210ENST00000484596 RIBC2Q9H4K1 309 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 ACTR8Q9H981 624 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 VAT1LQ9HCJ6 419 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 TECRQ9NZ01 308 aaKnown RBP5.55□□□□□ -1.52
UBR3-210ENST00000484596 THEGQ9P2T0 379 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 DIMT1Q9UNQ2 313 aaKnown RBP5.55□□□□□ -1.52
UBR3-210ENST00000484596 RGS12O14924 1447 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 DCCP43146 1447 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 SETD5Q9C0A6 1442 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 MSH6P52701 1360 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 PIK3R4Q99570 1358 aa5.55□□□□□ -1.52
UBR3-210ENST00000484596 NOTCH3Q9UM47 2321 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 PLCH1Q4KWH8 1693 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CDK12Q9NYV4 1490 aaPredicted RBP5.54□□□□□ -1.52
UBR3-210ENST00000484596 LMO7DNF2Z398 122 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 TRAFD1O14545 582 aaPredicted RBP5.54□□□□□ -1.52
UBR3-210ENST00000484596 ANGPT2O15123 496 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 LRCH4O75427 683 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CALCAP01258 141 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 ZNF883P0CG24 379 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 GLRA1P23415 457 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 ACADSBP45954 432 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 SLC6A8P48029 635 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 TDO2P48775 406 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 LIMK2P53671 638 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CALCOCO2Q13137 446 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 NME3Q13232 169 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 RAPSNQ13702 412 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 C2CD6Q53TS8 623 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 LIPJQ5W064 366 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CDC42EP5Q6NZY7 148 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 Q6ZVQ6 151 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 PPP1R42Q7Z4L9 355 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 MISPQ8IVT2 679 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CERS5Q8N5B7 392 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 BCORP1Q8N888 145 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 TAF15Q92804 592 aaKnown RBP eCLIP5.54□□□□□ -1.52
UBR3-210ENST00000484596 TMEM45BQ96B21 275 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CNRIP1Q96F85 164 aaPredicted RBP5.54□□□□□ -1.52
UBR3-210ENST00000484596 ZNF599Q96NL3 588 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 JPH2Q9BR39 696 aaPredicted RBP5.54□□□□□ -1.52
UBR3-210ENST00000484596 TEX13BQ9BXU2 312 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CENPMQ9NSP4 180 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 MED17Q9NVC6 651 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 ADGRL3Q9HAR2 1447 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 CDC42BPGQ6DT37 1551 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 NRAPQ86VF7 1730 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 METP08581 1390 aa5.54□□□□□ -1.52
UBR3-210ENST00000484596 USP32Q8NFA0 1604 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 A0A0J9YWU9 116 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 FAM230AA0A1W2PPH8 454 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 MEX3AA1L020 520 aaKnown RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 SH3PXD2BA1X283 911 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ARPC1BO15143 372 aaKnown RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 TLX2O43763 284 aaPredicted RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 IDH3BO43837 385 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 FGF19O95750 216 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 LYNP07948 512 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 CYP2F1P24903 491 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 PRDX2P32119 198 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 BACE1P56817 501 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 HSF2Q03933 536 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ZNF497Q6ZNH5 498 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 SLC22A16Q86VW1 577 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ZNF573Q86YE8 665 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 DND1Q8IYX4 353 aaKnown RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 PARP8Q8N3A8 854 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 DENND6BQ8NEG7 585 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 OR9Q2Q8NGE9 314 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 C8orf46Q8TAG6 207 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 THRSPQ92748 146 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 RAB7BQ96AH8 199 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 RBM18Q96H35 190 aaKnown RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 PCED1BQ96HM7 432 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 TRIM15Q9C019 465 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 FNDC4Q9H6D8 234 aaPredicted RBP5.53□□□□□ -1.52
UBR3-210ENST00000484596 YAE1D1Q9NRH1 226 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 NUDT4Q9NZJ9 180 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ATXN10Q9UBB4 475 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 BAIAP2L1Q9UHR4 511 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 DUSP12Q9UNI6 340 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ATG4BQ9Y4P1 393 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 GLI3P10071 1580 aa5.53□□□□□ -1.52
UBR3-210ENST00000484596 ABCC4O15439 1325 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 TRPM3Q9HCF6 1732 aaPredicted RBP5.52□□□□□ -1.53
UBR3-210ENST00000484596 PTCH1Q13635 1447 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 RRBP1Q9P2E9 1410 aaKnown RBP5.52□□□□□ -1.53
UBR3-210ENST00000484596 A0A1B0GWJ7 208 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 SHISA7A6NL88 538 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 MPHOSPH10O00566 681 aaKnown RBP5.52□□□□□ -1.53
UBR3-210ENST00000484596 INPP4BO15327 924 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 CHADO15335 359 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 VPS26AO75436 327 aa5.52□□□□□ -1.53
UBR3-210ENST00000484596 TOM1L1O75674 476 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms