RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 FCGR2CP31995 323 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 TSFMP43897 325 aaKnown RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 PGFP49763 221 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CRYBA2P53672 197 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ERVFC1-1P60608 527 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 TNFRSF17Q02223 184 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ZP4Q12836 540 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ENPP2Q13822 863 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 RBBP5Q15291 538 aaKnown RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ZMYND11Q15326 602 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF672Q499Z4 452 aaPredicted RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 PMF1Q6P1K2 205 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 TMEM184AQ6ZMB5 413 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 SLC26A9Q7LBE3 791 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CATSPERDQ86XM0 798 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CDH26Q8IXH8 852 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CENPSQ8N2Z9 138 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CHDHQ8NE62 594 aaPredicted RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 FBXO25Q8TCJ0 367 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ATP8B4Q8TF62 1192 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 RNF139Q8WU17 664 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 SPRYD4Q8WW59 207 aaPredicted RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 CTNNBL1Q8WYA6 563 aaPredicted RBP3.85□□□□□ -1.79
VPS13A-211ENST00000484581 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 AKR1E2Q96JD6 320 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 OVOL2Q9BRP0 275 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF556Q9HAH1 456 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 KCNK13Q9HB14 408 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 C1orf123Q9NWV4 160 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 MBD2Q9UBB5 411 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 TCF19Q9Y242 345 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 NAALAD2Q9Y3Q0 740 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 AP4B1Q9Y6B7 739 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 SPACA6W5XKT8 324 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 SYNJ2O15056 1496 aa3.85□□□□□ -1.79
VPS13A-211ENST00000484581 A0A0A6YYD4 124 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 WASHC1A8K0Z3 465 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 NPIPB9F8W1W9 429 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 H0YL77 283 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 H3BMH7 237 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 CYB561D2O14569 222 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 SNNO75324 88 aaPredicted RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 TOXO94900 526 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ADCY5O95622 1261 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 IGHEP01854 428 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 GSTT2P0CG29 244 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 GSTT2BP0CG30 244 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 SFTPCP11686 197 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 RFC2P35250 354 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 NOP14P78316 857 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 TCHHL1Q5QJ38 904 aaPredicted RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 SEL1L3Q68CR1 1132 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 PYHIN1Q6K0P9 492 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ATRAIDQ6UW56 229 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 PTAR1Q7Z6K3 402 aaPredicted RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 TBC1D10CQ8IV04 446 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ANKFN1Q8N957 763 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 OR56B2PQ8NGI1 322 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 OR4F5Q8NH21 305 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 TRMT10AQ8TBZ6 339 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 DNASE2BQ8WZ79 361 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 SLCO2A1Q92959 643 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 EMG1Q92979 244 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ANKRD27Q96NW4 1050 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF300Q96RE9 604 aaPredicted RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 CAPS2Q9BXY5 557 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 GCOM2Q9BZD3 368 aaPredicted RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 DHX33Q9H6R0 707 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ALG9Q9H6U8 611 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 VPS37BQ9H9H4 285 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 NLGN3Q9NZ94 848 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 KLRF1Q9NZS2 232 aa3.84□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF346Q9UL40 294 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 MRPS18CQ9Y3D5 142 aaKnown RBP3.84□□□□□ -1.79
VPS13A-211ENST00000484581 FER1L5A0AVI2 2057 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 XKRY2A2RUG3 117 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 LRIT2A6NDA9 550 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ZSCAN5BA6NJL1 495 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ASB14A6NK59 587 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF724A8MTY0 619 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 K7EQD1 137 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 BMPR1BO00238 502 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 IMPA2O14732 288 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ZSCAN12O43309 604 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 NEBLO76041 1014 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TM7SF2O76062 418 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 CD48P09326 243 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 CPN1P15169 458 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 RPL9P32969 192 aaKnown RBP3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TIMP3P35625 211 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TAGLN2P37802 199 aaKnown RBP3.83□□□□□ -1.8
VPS13A-211ENST00000484581 OSTNP61366 133 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 PHEXP78562 749 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms