RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TRIM3O75382 744 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-212ENST00000482251 GLI4P10075 376 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ADH7P40394 386 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 CASP3P42574 277 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 NAGLUP54802 743 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 PKNOX1P55347 436 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 CORO7P57737 925 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 KRTAP10-9P60411 292 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 MAP4K2Q12851 820 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 IMPG1Q17R60 797 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ZNF628Q5EBL2 1059 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 CFAP157Q5JU67 520 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 FNDC7Q5VTL7 733 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 TMEM198Q66K66 360 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 CLEC6AQ6EIG7 209 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ANGPTL8Q6UXH0 198 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 FRMD7Q6ZUT3 714 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ACAD11Q709F0 780 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 GBP7Q8N8V2 638 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-212ENST00000482251 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 NEIL3Q8TAT5 605 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ASB5Q8WWX0 329 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 LURAP1Q96LR2 239 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ZNF681Q96N22 645 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 NODALQ96S42 347 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 OSBPL11Q9BXB4 747 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 GIMAP4Q9NUV9 329 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 KLRF1Q9NZS2 232 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 SENP1Q9P0U3 644 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 Q9UFV3 132 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 DCDC2Q9UHG0 476 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 ZNF639Q9UID6 485 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 PSME2Q9UL46 239 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 MAPRE3Q9UPY8 281 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 C15orf41Q9Y2V0 281 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 APCP25054 2843 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 COPEO14579 308 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 PLIN3O60664 434 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 WDR1O75083 606 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 UGT2B11O75310 529 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 PPM1BO75688 479 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TOXO94900 526 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ANXA4P09525 319 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 KRT4P19013 534 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TCEA1P23193 301 aaKnown RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 EMDP50402 254 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TRA2BP62995 288 aaKnown RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TLE4Q04727 773 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TFF3Q07654 80 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ZNF763Q0D2J5 394 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ZNF155Q12901 538 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 SNTB1Q13884 538 aaKnown RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 PRSS53Q2L4Q9 553 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 EIPR1Q53HC9 387 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 WIPI1Q5MNZ9 446 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 DCST1Q5T197 706 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 SH2D5Q6ZV89 423 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 WDR53Q7Z5U6 358 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ULK2Q8IYT8 1036 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 C17orf47Q8NEP4 570 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 LILRB4Q8NHJ6 448 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 RDH11Q8TC12 318 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 HGDQ93099 445 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 TMBIM1Q969X1 311 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 CTHRC1Q96CG8 243 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 LCORQ96JN0 433 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-212ENST00000482251 ANGPTL4Q9BY76 406 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 KCNJ16Q9NPI9 418 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 CFL2Q9Y281 166 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 HCFC1P51610 2035 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 FREM3P0C091 2139 aa9.58□□□□□ -0.88
CPSF4-212ENST00000482251 KIAA1549Q9HCM3 1950 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 DCHS2Q6V1P9 2916 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 TLDC2A0PJX2 215 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CCDC151A5D8V7 595 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ANKRD33BA6NCL7 494 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 PRAMEF25A6NGN4 478 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 FRG2CA6NGY1 282 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 C17orf51A8MQB3 221 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 SNX4O95219 450 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 JUNP05412 331 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 DRD2P14416 443 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CPA3P15088 417 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 MSX1P28360 303 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 PTGDSP41222 190 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 MC3RP41968 323 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ZFP36L2P47974 494 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CDK9P50750 372 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 NCBP2P52298 156 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 RPP38P78345 283 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CRYZQ08257 329 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 C2orf80Q0P641 193 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 HEPACAMQ14CZ8 416 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ERCC6LQ2NKX8 1250 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CCDC153Q494R4 210 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 SH2D4BQ5SQS7 431 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 TMEM107Q6UX40 140 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms