RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PLEKHA6Q9Y2H5 1048 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 FLRT2O43155 660 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 SNNO75324 88 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 JRKO75564 520 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ERVFC1P60507 584 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HSD11B2P80365 405 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 GXYLT1Q4G148 440 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 FAM69BQ5VUD6 431 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HDAC2Q92769 488 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 TESCQ96BS2 214 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HDAC8Q9BY41 377 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 NXT1Q9UKK6 140 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 NUMBLQ9Y6R0 609 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 FEZF1A0PJY2 475 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 H7C2Y5 167 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CLPXO76031 633 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 INMTO95050 263 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 F7P08709 466 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 HSD17B1P14061 328 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HOXB9P17482 250 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 IL4RP24394 825 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 GCGRP47871 477 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 AFF3P51826 1226 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 RBPJQ06330 500 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 GRB7Q14451 532 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 RAB39AQ14964 217 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 IRF4Q15306 451 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 BTBD16Q32M84 506 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 OPN5Q6U736 354 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CDHR3Q6ZTQ4 885 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 URM1Q9BTM9 101 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM121BQ9BXQ6 578 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF334Q9HCZ1 680 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 NUP50Q9UKX7 468 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 A0A1W2PPL8 197 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HIDE1A8MVS5 230 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CASC3O15234 703 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 FMO6PO60774 539 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 KCNK5O95279 499 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF28P17035 718 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 M6PRP20645 277 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CCNOP22674 350 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CTBSQ01459 385 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 TUBB3Q13509 450 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 VEZF1Q14119 521 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 C1orf189Q5VU69 101 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HMBOX1Q6NT76 420 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 RPS27LQ71UM5 84 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 ASRGL1Q7L266 308 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ZER1Q7Z7L7 766 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ARMC10Q8N2F6 343 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 TEX26Q8N6G2 289 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 EPHX3Q9H6B9 360 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CPNE5Q9HCH3 593 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ADAM29Q9UKF5 820 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CNOT11Q9UKZ1 510 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 NENFQ9UMX5 172 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ABCG2Q9UNQ0 655 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 SLC35A3Q9Y2D2 325 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ST14Q9Y5Y6 855 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 C2orf92A0A1B0GVN3 265 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR14I1A6ND48 311 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DHRS4L1P0CG22 281 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DDCP20711 480 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MAGP20916 626 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 HOXC8P31273 242 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 HTR3AP46098 478 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DCDC1P59894 354 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SGCAQ16586 387 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ALG10Q5BKT4 473 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 LRRN1Q6UXK5 716 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ABHD12BQ7Z5M8 362 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 CNTN4Q8IWV2 1026 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 LNX2Q8N448 690 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR52E1Q8NGJ3 308 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR2L8Q8NGY9 312 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ARRDC2Q8TBH0 407 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DCSTAMPQ9H295 470 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF696Q9H7X3 374 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 TREX1Q9NSU2 369 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 THAP10Q9P2Z0 257 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 TRPM3Q9HCF6 1732 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MYH7P12883 1935 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ANTXRLA6NF34 631 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PSMD9O00233 223 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 RTCAO00442 366 aaKnown RBP8.99□□□□□ -0.97
GARNL3-216ENST00000481242 ADAM12O43184 909 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 OR7A10O76100 309 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SPARCP09486 303 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 RRADP55042 308 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 PRPS1P60891 318 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 TGFBR3Q03167 851 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 SLC3A1Q07837 685 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 MGAT3Q09327 533 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 DEFB133Q30KQ1 61 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 CYP27C1Q4G0S4 372 aa8.99□□□□□ -0.97
GARNL3-216ENST00000481242 LIX1LQ8IVB5 337 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms