RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 LTB4RQ15722 352 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 TCHHL1Q5QJ38 904 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 NSUN5P2Q63ZY6 315 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 TAOK1Q7L7X3 1001 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 PM20D2Q8IYS1 436 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 C1orf52Q8N6N3 182 aaKnown RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 FAM83FQ8NEG4 500 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 OR1J4Q8NGS1 313 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 DCAKDQ8WVC6 231 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 IFT81Q8WYA0 676 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 HGDQ93099 445 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 ABTB1Q969K4 478 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 OMA1Q96E52 524 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 HSPBAP1Q96EW2 488 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 GALNT9Q9HCQ5 603 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 RASSF1Q9NS23 344 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF629Q9UEG4 869 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF639Q9UID6 485 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF225Q9UK10 706 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 CFL2Q9Y281 166 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 PLLPQ9Y342 182 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 HRNRQ86YZ3 2850 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-214ENST00000480562 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 OR4F21O95013 312 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 CBX7O95931 251 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 ATP1B1P05026 303 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 NAGAP17050 411 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 PTGDSP41222 190 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 PLCXD2Q0VAA5 305 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 FBXL19-AS1Q494R0 122 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 FLYWCH1Q4VC44 716 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 TRMT12Q53H54 448 aaKnown RBP17.18■□□□□ 0.34
ABCF3-214ENST00000480562 NHSL2Q5HYW2 709 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 NUP54Q7Z3B4 507 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 TMEM151AQ8N4L1 468 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 OR52R1Q8NGF1 315 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 CNRIP1Q96F85 164 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-214ENST00000480562 LRRC46Q96FV0 321 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 LCORQ96JN0 433 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-214ENST00000480562 FMO2Q99518 471 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 OSBPL11Q9BXB4 747 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 BRF2Q9HAW0 419 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 SERHLQ9NQF3 203 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 ST6GALNAC2Q9UJ37 374 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 SNX6Q9UNH7 406 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 MAPRE3Q9UPY8 281 aa17.18■□□□□ 0.34
ABCF3-214ENST00000480562 FAM221AA4D161 298 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 CD8B2A6NJW9 211 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 A6NNC1 897 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 SNPHO15079 494 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 ICOSLGO75144 302 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 UGT2B11O75310 529 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 NME6O75414 186 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-214ENST00000480562 PCSK2P16519 638 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 TACR1P25103 407 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 PEX19P40855 299 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 MRPS35P82673 323 aaKnown RBP17.17■□□□□ 0.34
ABCF3-214ENST00000480562 SF3B4Q15427 424 aaKnown RBP eCLIP17.17■□□□□ 0.341e-9■■■■□ 23.6
ABCF3-214ENST00000480562 SLC30A6Q6NXT4 461 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 CDC20BQ86Y33 519 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 NOA1Q8NC60 698 aaKnown RBP17.17■□□□□ 0.34
ABCF3-214ENST00000480562 FAM222BQ8WU58 562 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 CTHRC1Q96CG8 243 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF681Q96N22 645 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 FOXC2Q99958 501 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 FAIM2Q9BWQ8 316 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 C1QTNF3Q9BXJ4 246 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 KLRF1Q9NZS2 232 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 HEY2Q9UBP5 337 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 TRPS1Q9UHF7 1281 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF180Q9UJW8 692 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 PSME2Q9UL46 239 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 CBLCQ9ULV8 474 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 PLEKHA6Q9Y2H5 1048 aa17.17■□□□□ 0.34
ABCF3-214ENST00000480562 MBD3L4A6NDZ8 208 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MBD3L3A6NE82 208 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MBD3L5A6NJ08 208 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MANBAO00462 879 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 CDH16O75309 829 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 ESRRBO95718 433 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 CHN1P15882 459 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 ECHS1P30084 290 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 HSD17B3P37058 310 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 SLCO1A2P46721 670 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 EMDP50402 254 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 CLCQ05315 142 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 CEBPEQ15744 281 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 WHAMMP3Q1A5X7 153 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MMGT1Q8N4V1 131 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 CDYL2Q8N8U2 506 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 C9orf106Q8NAJ2 232 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 GOT1L1Q8NHS2 421 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MBD3L2Q8NHZ7 208 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 RDH11Q8TC12 318 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 NINJ1Q92982 152 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 RMND5BQ96G75 393 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-214ENST00000480562 TSPYL1Q9H0U9 437 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 ANKRA2Q9H9E1 313 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms