RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 ALDH9A1P49189 494 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 CRISP1P54107 249 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 LSM11P83369 360 aaKnown RBP eCLIP9.6□□□□□ -0.87
COMMD4-203ENST00000480484 ARF5P84085 180 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 RHAGQ02094 409 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 RPA4Q13156 261 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 PLD1Q13393 1074 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 VEZF1Q14119 521 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
COMMD4-203ENST00000480484 FCN2Q15485 313 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 ASB18Q6ZVZ8 466 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 OTOP2Q7RTS6 562 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 OLIG3Q7RTU3 272 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 TSPAN33Q86UF1 283 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 SERPINA9Q86WD7 417 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 VRK3Q8IV63 474 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 C11orf65Q8NCR3 313 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 OR52P1PQ8NH57 321 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 SLC22A12Q96S37 553 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 TM9SF2Q99805 663 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 MND1Q9BWT6 205 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 HDHD2Q9H0R4 259 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 B3GAT2Q9NPZ5 323 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 SH3BP4Q9P0V3 963 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 STOML2Q9UJZ1 356 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 ING4Q9UNL4 249 aa9.6□□□□□ -0.87
COMMD4-203ENST00000480484 SH3D21A4FU49 640 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CASKO14936 926 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 TPST2O60704 377 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 HEXBP07686 556 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CR2P20023 1033 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 PRPS1L1P21108 318 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 NOGQ13253 232 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 IER5LQ5T953 404 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 FRMPD2BQ6IN97 320 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 TYW3Q6IPR3 259 aaKnown RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 FAM122CQ6P4D5 195 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 GDPGP1Q6ZNW5 385 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ZNF765Q7L2R6 523 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 DEFB128Q7Z7B8 93 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 KCTD7Q96MP8 289 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 MTERF1Q99551 399 aaKnown RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 SLC29A3Q9BZD2 475 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 NDUFB11Q9NX14 153 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ACSL6Q9UKU0 697 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 TRIM77I1YAP6 450 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 KDELR3O43731 214 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 TRIM3O75382 744 aaPredicted RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 NCR1O76036 304 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 TRBC1P01850 177 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 F11P03951 625 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 HMGA1P17096 107 aaKnown RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ZNF7P17097 686 aaPredicted RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 C5AR1P21730 350 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 AVPR1BP47901 424 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 PTPN5P54829 565 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CDH4P55283 916 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 WNT3P56703 355 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ABATP80404 500 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 RGNQ15493 299 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 BCL2L15Q5TBC7 163 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 KRT78Q8N1N4 520 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CELF5Q8N6W0 485 aaKnown RBP9.59□□□□□ -0.87
COMMD4-203ENST00000480484 LRRC17Q8N6Y2 441 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ZFP41Q8N8Y5 198 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 FAM46DQ8NEK8 389 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 AUTS2Q8WXX7 1259 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ST8SIA4Q92187 359 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 RIT1Q92963 219 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CCDC74BQ96LY2 380 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 DUSP26Q9BV47 211 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ADGRE3Q9BY15 652 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 MED28Q9H204 178 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 P2RY12Q9H244 342 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 CDCP1Q9H5V8 836 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 ASB8Q9H765 288 aa9.59□□□□□ -0.87
COMMD4-203ENST00000480484 HELZP42694 1942 aaKnown RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 TRAV6A0A075B6T7 132 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 GAPDHSO14556 408 aaPredicted RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 KHNYNO15037 678 aaKnown RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 GCM2O75603 506 aaPredicted RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 IL1AP01583 271 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 TP53P04637 393 aaPredicted RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 ANXA5P08758 320 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 AMD1P17707 334 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 IL32P24001 234 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 GPR3P46089 330 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 SLC11A2P49281 568 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 SRSF11Q05519 484 aaKnown RBP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 GAB1Q13480 694 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 ZMYND11Q15326 602 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 ANGPT1Q15389 498 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 ADIPOQQ15848 244 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
COMMD4-203ENST00000480484 KIF18BQ86Y91 864 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 MMP21Q8N119 569 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 TCEANCQ8N8B7 351 aa9.58□□□□□ -0.88
COMMD4-203ENST00000480484 FAM181AQ8N9Y4 354 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms