RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KATNAL2Q8IYT4 538 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 PIAS4Q8N2W9 510 aaPredicted RBP10.52□□□□□ -0.73
USP11-208ENST00000480104 OR56A3Q8NH54 315 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 HPS1Q92902 700 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 HGDQ93099 445 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 GMPPAQ96IJ6 420 aaPredicted RBP10.52□□□□□ -0.73
USP11-208ENST00000480104 SORCS2Q96PQ0 1159 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 SNX18Q96RF0 628 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 HBEGFQ99075 208 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 SLC6A7Q99884 636 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 MAPKAP1Q9BPZ7 522 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 SLITRK2Q9H156 845 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
USP11-208ENST00000480104 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 COPS7BQ9H9Q2 264 aaPredicted RBP10.52□□□□□ -0.73
USP11-208ENST00000480104 TREX1Q9NSU2 369 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 NPAP1Q9NZP6 1156 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 POU2F3Q9UKI9 436 aa10.52□□□□□ -0.73
USP11-208ENST00000480104 DNAH3Q8TD57 4116 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 PRAMEF25A6NGN4 478 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 PJA2O43164 708 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 F7P08709 466 aaPredicted RBP10.51□□□□□ -0.73
USP11-208ENST00000480104 TMEM253P0C7T8 217 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 KRT15P19012 456 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 MYL5Q02045 173 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 SPOCK1Q08629 439 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 SFRP5Q5T4F7 317 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 TMEM81Q6P7N7 255 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 SDCCAG8Q86SQ7 713 aaPredicted RBP10.51□□□□□ -0.73
USP11-208ENST00000480104 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 GABRG1Q8N1C3 465 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 ZNF540Q8NDQ6 660 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 OR2L5Q8NG80 312 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 RBM18Q96H35 190 aaKnown RBP10.51□□□□□ -0.73
USP11-208ENST00000480104 TRMOQ9BU70 441 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 STMN4Q9H169 189 aaPredicted RBP10.51□□□□□ -0.73
USP11-208ENST00000480104 PELI2Q9HAT8 420 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 PARVBQ9HBI1 364 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 LYRM4Q9HD34 91 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 FBXO34Q9NWN3 711 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 KLHL42Q9P2K6 505 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
USP11-208ENST00000480104 NPIPA5A0A0B4J1W7 369 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 CCT8L1PA6NM43 557 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 POM121CA8CG34 1229 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 EFCAB8A8MWE9 144 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NPIPA7E9PJI5 369 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 LILRA1O75019 489 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 PPM1BO75688 479 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NTN1O95631 604 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 TBX6O95947 436 aaPredicted RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 TACSTD2P09758 323 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NUDT17P0C025 328 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NPIPA8P0DM63 369 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 BMP4P12644 408 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 ALOX15P16050 662 aaPredicted RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 TPSB2P20231 275 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NMBRP28336 390 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 SSTR4P31391 388 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 CRADDP78560 199 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 SNTA1Q13424 505 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 TPSAB1Q15661 275 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NNATQ16517 81 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 SPRED3Q2MJR0 410 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 DEPDC1Q5TB30 811 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 HLA-DQA1Q5Y7H0 255 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 DUPD1Q68J44 220 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 OR5M10Q6IEU7 315 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 SLC22A25Q6T423 547 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NXPE4Q6UWF7 544 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 CD200R1Q8TD46 325 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 GFM2Q969S9 779 aaKnown RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 C1QTNF5Q9BXJ0 243 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 REXO4Q9GZR2 422 aaKnown RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 PDP1Q9P0J1 537 aaPredicted RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
USP11-208ENST00000480104 PPIAL4AQ9Y536 164 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP11-208ENST00000480104 PMF1-BGLAPU3KQ54 211 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 SPACA6W5XKT8 324 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
USP11-208ENST00000480104 RYR1P21817 5038 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 B4DXG7 233 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 VAPBO95292 243 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 AIFM1O95831 613 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 GCH1P30793 250 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 GDF10P55107 478 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 IL13RA1P78552 427 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 CHRNB3Q05901 458 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 CCNIQ14094 377 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 PPA1Q15181 289 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 STK11Q15831 433 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ADPRMQ3LIE5 342 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 RAET1LQ5VY80 246 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ZNF544Q6NX49 715 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 Q6ZSR9 355 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms