RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 EEDO75530 441 aaKnown RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 CD1DP15813 335 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 EPB42P16452 691 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 PTX3P26022 381 aaPredicted RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 LOXP28300 417 aaPredicted RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 PTGDSP41222 190 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 PIK3CBP42338 1070 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 ARFIP1P53367 373 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 NR1H2P55055 460 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 ATP5J2P56134 94 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 ATP6V0D1P61421 351 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 POU4F1Q01851 419 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 CAPRIN1Q14444 709 aaKnown RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 OR2A2Q6IF42 318 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 WDSUB1Q8N9V3 476 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 OR7G1Q8NGA0 311 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 IGFBPL1Q8WX77 278 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 HGDQ93099 445 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 MTERF1Q99551 399 aaKnown RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 NXF5Q9H1B4 397 aaKnown RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 RHOJQ9H4E5 214 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 RNF112Q9ULX5 631 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 A0A0A6YYD5 115 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 A0A1W2PS29 197 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 HCRTR2O43614 444 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 WISP3O95389 354 aaPredicted RBP15.54■□□□□ 0.08
VIM-204ENST00000478746 AIFM1O95831 613 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 GPX3P22352 226 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 CLDN18P56856 261 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 C6orf163Q5TEZ5 329 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 GRHL2Q6ISB3 625 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 MAPK1IP1LQ8NDC0 245 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 EXT2Q93063 718 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 DDX31Q9H8H2 851 aaKnown RBP15.54■□□□□ 0.08
VIM-204ENST00000478746 CAB39LQ9H9S4 337 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 NSMCE4AQ9NXX6 385 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 MOCS1Q9NZB8 636 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 MTO1Q9Y2Z2 717 aaKnown RBP15.54■□□□□ 0.08
VIM-204ENST00000478746 JRKLQ9Y4A0 524 aa15.54■□□□□ 0.08
VIM-204ENST00000478746 GOLGA6L10A0A0M3HER8 536 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 LRRC14BA6NHZ5 514 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 TMCC2O75069 709 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 TP53P04637 393 aaPredicted RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 ZNF708P17019 499 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 NT5EP21589 574 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 CNTFP26441 200 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 CCKARP32238 428 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 BSGP35613 385 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 KIR2DL2P43627 348 aaPredicted RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 ILF2Q12905 390 aaKnown RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 NNATQ16517 81 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 ANKRD34AQ69YU3 496 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 OR52E8Q6IFG1 317 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 MYLK4Q86YV6 388 aaPredicted RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 PLCZ1Q86YW0 608 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 OR4K14Q8NGD5 310 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 OMA1Q96E52 524 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 TSPAN17Q96FV3 270 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 ZNF845Q96IR2 970 aaPredicted RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 SFXN2Q96NB2 322 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 ZNF717Q9BY31 904 aaPredicted RBP15.53■□□□□ 0.08
VIM-204ENST00000478746 OPTCQ9UBM4 332 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 DTX4Q9Y2E6 619 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 PCDHGA11Q9Y5H2 935 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 ABCA1O95477 2261 aa15.53■□□□□ 0.08
VIM-204ENST00000478746 PRAMEF25A6NGN4 478 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 SLC22A20A6NK97 555 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 RNF223E7ERA6 249 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 K7EPI3 171 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 PHGDHO43175 533 aaKnown RBP15.52■□□□□ 0.08
VIM-204ENST00000478746 SOX30O94993 753 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 S1PR1P21453 382 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 TBXA2RP21731 343 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 IVDP26440 423 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 SRD5A2P31213 254 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 GMPRP36959 345 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 XKP51811 444 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 SIRPAP78324 504 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 PHEXP78562 749 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 MORF4L2Q15014 288 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 BCL2A1Q16548 175 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 C22orf34Q6ZV56 151 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 SH2D5Q6ZV89 423 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 HIPK1Q86Z02 1210 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 ZNF610Q8N9Z0 462 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 DTNBP1Q96EV8 351 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 LCORQ96JN0 433 aaPredicted RBP15.52■□□□□ 0.08
VIM-204ENST00000478746 MCMBPQ9BTE3 642 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 BCAP29Q9UHQ4 241 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 CFL2Q9Y281 166 aa15.52■□□□□ 0.08
VIM-204ENST00000478746 MRPS18CQ9Y3D5 142 aaKnown RBP15.52■□□□□ 0.08
VIM-204ENST00000478746 UGT2B11O75310 529 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 GBAP04062 536 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 ARL4CP56559 192 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 PLCXD2Q0VAA5 305 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 VEZF1Q14119 521 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 CLEC12BQ2HXU8 276 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 BEX5Q5H9J7 111 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 STAG3L4Q8TBR4 150 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms