RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 CIDECQ96AQ7 238 aaPredicted RBP12.71□□□□□ -0.38
DFFB-209ENST00000477548 TEFMQ96QE5 360 aaKnown RBP12.71□□□□□ -0.38
DFFB-209ENST00000477548 OR4K3Q96R72 315 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 SPRTNQ9H040 489 aaPredicted RBP12.71□□□□□ -0.38
DFFB-209ENST00000477548 SHARPINQ9H0F6 387 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 SGK2Q9HBY8 427 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 DLL4Q9NR61 685 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 KIF25Q9UIL4 384 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 SCP2D1Q9UJQ7 156 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 SLC9A8Q9Y2E8 581 aa12.71□□□□□ -0.38
DFFB-209ENST00000477548 MEIKINA0A087WXM9 373 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 HNRNPCL2B2RXH8 293 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 CLDN7O95471 211 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 C8GP07360 202 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 TFPIP10646 304 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 LCN1P31025 176 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 GPR85P60893 370 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RHOAP61586 193 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RAB40BQ12829 278 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 DOC2AQ14183 400 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ZSWIM7Q19AV6 140 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RPS26P11Q5JNZ5 115 aaPredicted RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 LIPJQ5W064 366 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 IL20RBQ6UXL0 311 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 C16orf59Q7L2K0 433 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ATAD1Q8NBU5 361 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 WDR20Q8TBZ3 569 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 SMG7Q92540 1137 aaKnown RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 MYO19Q96H55 970 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RADILQ96JH8 1075 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 TRPM5Q9NZQ8 1165 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 NLRC5Q86WI3 1866 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 C5orf58C9J3I9 102 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 YKT6O15498 198 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 NME6O75414 186 aaPredicted RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 GBAP04062 536 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 S100A6P06703 90 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ARAFP10398 606 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ACP2P11117 423 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 GIFP27352 417 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 BMP8BP34820 402 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 DSC1Q08554 894 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 TUSC3Q13454 348 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RNASE12Q5GAN4 147 aaKnown RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 ACSM5Q6NUN0 579 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 BMP8AQ7Z5Y6 402 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 OR2T4Q8NH00 348 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 RAET1EQ8TD07 263 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ST8SIA2Q92186 375 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ARHGAP9Q9BRR9 750 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 ACSL5Q9ULC5 683 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 EXOSC1Q9Y3B2 195 aaKnown RBP12.7□□□□□ -0.38
DFFB-209ENST00000477548 PIKFYVEQ9Y2I7 2098 aa12.7□□□□□ -0.38
DFFB-209ENST00000477548 E7EQ34 232 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 LALBAP00709 142 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 TYMPP19971 482 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 SDHBP21912 280 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 GPR135Q8IZ08 494 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 ACOT12Q8WYK0 555 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 SCRN2Q96FV2 425 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
DFFB-209ENST00000477548 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 RNF215Q9Y6U7 377 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 H3BNC9 293 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 PI15O43692 258 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 CLDN11O75508 207 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 HOXC8P31273 242 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 CD52P31358 61 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 NSG1P42857 185 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 MTNR1AP48039 350 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 PITPNBP48739 271 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 PFN3P60673 137 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 TSPAN5P62079 268 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 ARF5P84085 180 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 GPR68Q15743 365 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 ZNF704Q6ZNC4 412 aaPredicted RBP12.69□□□□□ -0.38
DFFB-209ENST00000477548 LRRC28Q86X40 367 aaPredicted RBP12.69□□□□□ -0.38
DFFB-209ENST00000477548 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 OR5M3Q8NGP4 307 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 HSD17B8Q92506 261 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 PTP4A1Q93096 173 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 C11orf24Q96F05 449 aaPredicted RBP12.69□□□□□ -0.38
DFFB-209ENST00000477548 C12orf66Q96MD2 445 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 CACNG6Q9BXT2 260 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 OSGEPL1Q9H4B0 414 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 REEP4Q9H6H4 257 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
DFFB-209ENST00000477548 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
DFFB-209ENST00000477548 TRBV5-4A0A0C4DH59 114 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms