RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CHTF18Q8WVB6 975 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PIK3R3Q92569 461 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 MBOAT4Q96T53 435 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 RNF167Q9H6Y7 350 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 DKK3Q9UBP4 350 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PHF11Q9UIL8 331 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 GPR34Q9UPC5 381 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 IFT52Q9Y366 437 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 CLCA3PQ9Y6N3 262 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ZDBF2Q9HCK1 2354 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ADAP00813 363 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 C1QCP02747 245 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SLC2A2P11168 524 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ITGB8P26012 769 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 GPNMBQ14956 572 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 LTB4RQ15722 352 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 FLYWCH1Q4VC44 716 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 LRIF1Q5T3J3 769 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 DCDC5Q6ZRR9 648 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 VRK2Q86Y07 508 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 KLBQ86Z14 1044 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SFTPA1Q8IWL2 248 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 LRRC25Q8N386 305 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 FRMD1Q8N878 549 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 MMABQ96EY8 250 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 OR5M11Q96RB7 305 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 EPYCQ99645 322 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 APOOQ9BUR5 198 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SPATA9Q9BWV2 254 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 BRD7Q9NPI1 651 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 IRGMA1A4Y4 181 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 H0Y8X5 98 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 DRD2P14416 443 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 GNSP15586 552 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 HIST1H1TP22492 207 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 CTBSQ01459 385 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 NDUFA9Q16795 377 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ADPRMQ3LIE5 342 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 EIPR1Q53HC9 387 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 OR2G6Q5TZ20 316 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 NIPAL1Q6NVV3 410 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PODNL1Q6PEZ8 512 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 FIGLAQ6QHK4 219 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TMC8Q8IU68 726 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 RIMKLAQ8IXN7 391 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TMIEQ8NEW7 156 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TMCO6Q96DC7 493 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 POLMQ9NP87 494 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 SH2B3Q9UQQ2 575 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 HSPE1-MOB4S4R3N1 261 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 CKAP5Q14008 2032 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PIKFYVEQ9Y2I7 2098 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 A0A1B0GVC2 190 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 A6NIN4 97 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ANKRD28O15084 1053 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TNFP01375 233 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ARAFP10398 606 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 GUCA1AP43080 201 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 MTNR1AP48039 350 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 CHRNEQ04844 493 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 RPA4Q13156 261 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 KIAA0040Q15053 153 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 LCN1P1Q5VSP4 162 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PLBD1Q6P4A8 553 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 USP53Q70EK8 1073 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 OAFQ86UD1 273 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TSTD1Q8NFU3 115 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 BBS10Q8TAM1 723 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 NEIL3Q8TAT5 605 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PHOSPHO1Q8TCT1 267 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 MVB12BQ9H7P6 319 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TRPV5Q9NQA5 729 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 RPRD1BQ9NQG5 326 aaKnown RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 SEC14L4Q9UDX3 406 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ZFR2Q9UPR6 939 aaKnown RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 TRPM6Q9BX84 2022 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 MCIDASD6RGH6 385 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF701M0R085 212 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 SDC3O75056 442 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 RAB36O95755 333 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 GRPRP30550 384 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PYCR1P32322 319 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 LIPAP38571 399 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 LRIT3Q3SXY7 679 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 SLC36A4Q6YBV0 504 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 IKBIPQ70UQ0 350 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 OR5K2Q8NHB8 316 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 LMX1AQ8TE12 382 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ADAMTS16Q8TE57 1224 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ZDHHC5Q9C0B5 715 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 EGLN3Q9H6Z9 239 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PAK6Q9NQU5 681 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 USP36Q9P275 1121 aaKnown RBP10.42□□□□□ -0.74
COL27A1-204ENST00000477421 ATG4BQ9Y4P1 393 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
COL27A1-204ENST00000477421 PROM1O43490 865 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CPNE3O75131 537 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms