RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	SERINC2	Q96SA4	455 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MTERF1	Q99551	399 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TIMP4	Q99727	224 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SARG	Q9BW04	601 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAIM2	Q9BWQ8	316 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NPL	Q9BXD5	320 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RHBG	Q9H310	441 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MANSC1	Q9H8J5	431 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BRF2	Q9HAW0	419 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	APMAP	Q9HDC9	416 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAM60A	Q9NP50	221 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LHX9	Q9NQ69	397 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STARD5	Q9NSY2	213 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GIMAP4	Q9NUV9	329 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	THAP1	Q9NVV9	213 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LYAR	Q9NX58	379 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PSD3	Q9NYI0	1048 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC17A7	Q9P2U7	560 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RNF7	Q9UBF6	113 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DHCR7	Q9UBM7	475 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TRPC4	Q9UBN4	977 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DKK4	Q9UBT3	224 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PHF11	Q9UIL8	331 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PILRA	Q9UKJ1	303 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IKZF3	Q9UKT9	509 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC12A4	Q9UP95	1085 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FARSA	Q9Y285	508 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FIS1	Q9Y3D6	152 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RP1	P56715	2156 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PCM1	Q15154	2024 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		A0A0A6YYC8	382 aa	Predicted RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GOLGA8Q	A0A0J9YX86	632 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GNG14	A0A1W2PPG7	69 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GOLGA8O	A6NCC3	632 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FOXO6	A8MYZ6	492 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GOLGA8N	F8WBI6	632 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		G3V2L1	256 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		I3L1I5	382 aa	Predicted RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PROM1	O43490	865 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LCMT2	O60294	686 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	VPS4B	O75351	444 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SEC22B	O75396	215 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SEMA3D	O95025	777 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BMP10	O95393	424 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TOP3B	O95985	862 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CYC1	P08574	325 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAB40AL	P0C0E4	278 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SBK3	P0C264	359 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TROVE2	P10155	538 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	COX7A2	P14406	83 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IL1RN	P18510	177 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CPN2	P22792	545 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GATA3	P23771	443 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RPL3	P39023	403 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GSTM5	P46439	218 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMPRSS3	P57727	454 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CTXN1	P60606	82 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAB8A	P61006	207 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RPS13	P62277	151 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STX4	Q12846	297 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TRAF3	Q13114	568 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BIK	Q13323	160 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DNASE1L3	Q13609	305 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RPS6KA2	Q15349	733 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HKDC1	Q2TB90	917 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PRTG	Q2VWP7	1150 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MINDY4	Q4G0A6	757 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DEFB134	Q4QY38	66 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ATP6AP1L	Q52LC2	224 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CCNYL2	Q5T2Q4	361 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DEPDC1	Q5TB30	811 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4C11	Q6IEV9	310 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF788	Q6ZQV5	615 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SH2D5	Q6ZV89	423 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SYVN1	Q86TM6	617 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CUZD1	Q86UP6	607 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MARCH9	Q86YJ5	346 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BMPER	Q8N8U9	685 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF740	Q8NDX6	193 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR52B6	Q8NGF0	335 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HUS1B	Q8NHY5	278 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FLVCR1-AS1	Q8TAF5	88 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AGAP11	Q8TF27	550 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF473	Q8WTR7	871 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NRG4	Q8WWG1	115 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STARD8	Q92502	1023 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TM4SF19	Q96DZ7	209 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PPP3R2	Q96LZ3	170 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FER1L6-AS2	Q96M78	137 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CATSPER2	Q96P56	530 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR1F2P	Q96R84	312 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PRPF18	Q99633	342 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NRTN	Q99748	197 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms