RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	ARPC3	O15145	178 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ITM2A	O43736	263 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	DNAJB6	O75190	326 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	NDUFS7	O75251	213 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TRIM3	O75382	744 aa	Predicted RBP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TROVE2	P10155	538 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	PSMA2	P25787	234 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	LONP1	P36776	959 aa	Known RBP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	HSD17B2	P37059	387 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ABCG1	P45844	678 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	AVPR1B	P47901	424 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	NOVA1	P51513	510 aa	Known RBP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	RIPK4	P57078	832 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	CX3CL1	P78423	397 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ZNF415	Q09FC8	603 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	DUSP6	Q16828	381 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ODF4	Q2M2E3	257 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	LY6G5C	Q5SRR4	150 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	STPG1	Q5TH74	334 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	LIPK	Q5VXJ0	399 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TTC19	Q6DKK2	380 aa	Predicted RBP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TMEM225	Q6GV28	225 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	CTR9	Q6PD62	1173 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TMEM184A	Q6ZMB5	413 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	LIMS2	Q7Z4I7	341 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ECHDC2	Q86YB7	292 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	SPATA4	Q8NEY3	305 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	OR6M1	Q8NGM8	313 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	OR13J1	Q8NGT2	312 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	HAS1	Q92839	578 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ISG20	Q96AZ6	181 aa	Known RBP	6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	FAM20A	Q96MK3	541 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	NDN	Q99608	321 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	UBAC1	Q9BSL1	405 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	FUNDC2	Q9BWH2	189 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	GSDMC	Q9BYG8	508 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	SPRY4	Q9C004	299 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	MAGT1	Q9H0U3	335 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	SLITRK6	Q9H5Y7	841 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	PDGFC	Q9NRA1	345 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	TMEM45A	Q9NWC5	275 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	ERVK-18	Q9QC07	812 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	EPHA6	Q9UF33	1036 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	FZD10	Q9ULW2	581 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	NEUROG3	Q9Y4Z2	214 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	HS3ST3A1	Q9Y663	406 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	DENND4A	Q7Z401	1863 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	APC2	O95996	2303 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	PTPRQ	Q9UMZ3	2332 aa		6.24	□□□□□ -1.41
LRCH3-215	ENST00000476664	MYH7B	A7E2Y1	1941 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	TRAV26-1	A0A087WT03	109 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	TRBV5-3	A0A0A0MS03	114 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ANTXRL	A6NF34	631 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664		E5RGE8	158 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	TMEM178B	H3BS89	294 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664		J3KR12	359 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	CLDN5	O00501	218 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	GAPDHS	O14556	408 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	CETN3	O15182	167 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ALOX15B	O15296	676 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	NMT2	O60551	498 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	MTRF1	O75570	445 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ANP32D	O95626	131 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ESRRB	O95718	433 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	PEX11B	O96011	259 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	PABPC4L	P0CB38	370 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	HOXB8	P17481	243 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	AMD1	P17707	334 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	BMP7	P18075	431 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	RPL3	P39023	403 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	NKX2-1	P43699	371 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	BST1	Q10588	318 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	HNRNPD	Q14103	355 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	SPHAR	Q15513	63 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	PCK2	Q16822	640 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	HKDC1	Q2TB90	917 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	AMZ1	Q400G9	498 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	DEF8	Q6ZN54	512 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ANO5	Q75V66	913 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	CPEB2	Q7Z5Q1	589 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	LHFPL4	Q7Z7J7	247 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	GPSM1	Q86YR5	675 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	WDR49	Q8IV35	697 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	GBGT1	Q8N5D6	347 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	BBS1	Q8NFJ9	593 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	OR10Q1	Q8NGQ4	319 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	CACTIN	Q8WUQ7	758 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	SPRYD4	Q8WW59	207 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	IRGQ	Q8WZA9	623 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ANP32B	Q92688	251 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	HPDL	Q96IR7	371 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	PDLIM2	Q96JY6	352 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ANKRD27	Q96NW4	1050 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	SH2D3A	Q9BRG2	576 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	RBM24	Q9BX46	236 aa	Known RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	LRMDA	Q9H2I8	198 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	FAM124B	Q9H5Z6	455 aa	Predicted RBP	6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	LZTFL1	Q9NQ48	299 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	PTTG2	Q9NZH5	202 aa		6.23	□□□□□ -1.41

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