RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	ATOH8	Q96SQ7	321 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ABHD6	Q9BV23	337 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	RAB34	Q9BZG1	259 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	STRADB	Q9C0K7	418 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	SDCBP2	Q9H190	292 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	MMP27	Q9H306	513 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	KCNK15	Q9H427	330 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZDHHC18	Q9NUE0	388 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PDRG1	Q9NUG6	133 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	FAM49B	Q9NUQ9	324 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ATAD3A	Q9NVI7	634 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	TAS2R14	Q9NYV8	317 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	NPAP1	Q9NZP6	1156 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CRNN	Q9UBG3	495 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	HMGXB4	Q9UGU5	601 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	STOML2	Q9UJZ1	356 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ERVW-1	Q9UQF0	538 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	KIF3A	Q9Y496	699 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRSS21	Q9Y6M0	314 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	RNF215	Q9Y6U7	377 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ATP8B3	O60423	1300 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCDC168	Q8NDH2	2452 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	IGLV9-49	A0A0B4J1Y8	123 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	IGHV4-61	A0A0C4DH41	118 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	GOLGA6L7	A0A1B0GV03	622 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRSS51	A0A1B0GVH4	220 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912		A0A1W2PRQ8	180 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TRBC2	A0A5B9	178 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	NDUFAF8	A1L188	74 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	EFCAB7	A8K855	629 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912		A8MXE2	369 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	RNF103	O00237	685 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SLC7A4	O43246	635 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TBL1X	O60907	577 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TBCA	O75347	108 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CREG1	O75629	220 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZWINT	O95229	277 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	IGHV4-59	P01825	116 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	FAM157C	P0CG43	387 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	MYBL1	P10243	752 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCL4	P13236	92 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	HNRNPA2B1	P22626	353 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CPT2	P23786	658 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CD82	P27701	267 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	ADORA2B	P29275	332 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	EEF1D	P29692	281 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	UGT1A3	P35503	534 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	BMX	P51813	675 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	RAD23A	P54725	363 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	MYL6	P60660	151 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	ST8SIA6	P61647	398 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	C1orf61	Q13536	156 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	ALCAM	Q13740	583 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TRIM29	Q14134	588 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	KRT33B	Q14525	404 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	ELAVL3	Q14576	367 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	C16orf72	Q14CZ0	275 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PSMD6	Q15008	389 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	DEFB109B	Q30KR1	87 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	FAM98B	Q52LJ0	330 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TCP11X2	Q5H9J9	407 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PIP5KL1	Q5T9C9	394 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SEL1L3	Q68CR1	1132 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PWWP2B	Q6NUJ5	590 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	RFWD3	Q6PCD5	774 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SCARA5	Q6ZMJ2	495 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	INTS8	Q75QN2	995 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SLC16A9	Q7RTY1	509 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCDC186	Q7Z3E2	898 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PARG	Q86W56	976 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	WDR49	Q8IV35	697 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	SLC34A3	Q8N130	599 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	APOBEC4	Q8WW27	367 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	NAT6	Q93015	286 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TMA16	Q96EY4	203 aa	Known RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	GIMAP5	Q96F15	307 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	POM121L2	Q96KW2	1035 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	BMF	Q96LC9	184 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	FAM81B	Q96LP2	452 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CATSPER2	Q96P56	530 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	LRRC61	Q9BV99	259 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	FGFBP2	Q9BYJ0	223 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	CSNK1G3	Q9Y6M4	447 aa		4.09	□□□□□ -1.75
PRKD3-208	ENST00000475912	MYH10	P35580	1976 aa		4.09	□□□□□ -1.76
PRKD3-208	ENST00000475912	SCN8A	Q9UQD0	1980 aa		4.09	□□□□□ -1.76
PRKD3-208	ENST00000475912	ELOVL7	A1L3X0	281 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	URAD	A6NGE7	173 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TMX2-CTNND1	H3BSU7	103 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	RAD51B	O15315	384 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SORBS2	O94875	1100 aa	Known RBP	4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	FAM200B	P0CF97	657 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	RALA	P11233	206 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	VPREB1	P12018	145 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms