RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF717Q9BY31 904 aaPredicted RBP14.55□□□□□ -0.08
CPSF3-203ENST00000475482 PRDM7Q9NQW5 492 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 SH3BP4Q9P0V3 963 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 BCAP29Q9UHQ4 241 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 PHF11Q9UIL8 331 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 PCDHGB4Q9UN71 923 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 MMACHCQ9Y4U1 282 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 SPACA6W5XKT8 324 aa14.55□□□□□ -0.08
CPSF3-203ENST00000475482 A8MUI8 341 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 RTCAO00442 366 aaKnown RBP14.54□□□□□ -0.08
CPSF3-203ENST00000475482 B3GALT2O43825 422 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 MAN1A2O60476 641 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 TBX19O60806 448 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 PRAMEF2O60811 474 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 SCELO95171 688 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 GBAP04062 536 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 CD1EP15812 388 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 DDCP20711 480 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 ATP5A1P25705 553 aaKnown RBP14.54□□□□□ -0.08
CPSF3-203ENST00000475482 TRPC1P48995 793 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 BTN3A2P78410 334 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 SLAMF1Q13291 335 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 PDE7AQ13946 482 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 MEP1AQ16819 746 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 C6orf10Q5SRN2 563 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 FAM180AQ6UWF9 173 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 FBXW8Q8N3Y1 598 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 MDS2Q8NDY4 140 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 CDRT15Q96T59 188 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 NECTIN3Q9NQS3 549 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 MS4A12Q9NXJ0 267 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 ADA2Q9NZK5 511 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 EHD3Q9NZN3 535 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 PPIEQ9UNP9 301 aaKnown RBP14.54□□□□□ -0.08
CPSF3-203ENST00000475482 SLC5A6Q9Y289 635 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 L3MBTL1Q9Y468 752 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.54□□□□□ -0.08
CPSF3-203ENST00000475482 MYO7BQ6PIF6 2116 aa14.54□□□□□ -0.08
CPSF3-203ENST00000475482 A0A096LPI6 279 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 PRSS51A0A1B0GVH4 220 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 SAGE2PA6NJ88 616 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 GABRR3A8MPY1 467 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 RNASET2O00584 256 aaKnown RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 CYR61O00622 381 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 RFXANKO14593 260 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 DNAJA2O60884 412 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 ANP32DO95626 131 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 STAMBPO95630 424 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 F10P00742 488 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 IL3P08700 152 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 MAOAP21397 527 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 TLX1P31314 330 aaPredicted RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 BUD31P41223 144 aaPredicted RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 RAB38P57729 211 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 PAGE3Q5JUK9 113 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 FCRLBQ6BAA4 426 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 C8orf82Q6P1X6 216 aaPredicted RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 TUBA3EQ6PEY2 450 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 SLC2A7Q6PXP3 512 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 C10orf67Q8IYJ2 551 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 BEST3Q8N1M1 668 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 SLC5A8Q8N695 610 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 OR7A2PQ8NGA2 310 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 NR4A3Q92570 626 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 GTF2H4Q92759 462 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 TM4SF18Q96CE8 201 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 GPATCH1Q9BRR8 931 aaKnown RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 SORBS1Q9BX66 1292 aaKnown RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 TRIM45Q9H8W5 580 aaPredicted RBP14.53□□□□□ -0.08
CPSF3-203ENST00000475482 IL1RL2Q9HB29 575 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 OLAHQ9NV23 265 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 ABI3Q9P2A4 366 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 BTNL2Q9UIR0 455 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 PSME2Q9UL46 239 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 DAPP1Q9UN19 280 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 UNC79Q9P2D8 2635 aa14.53□□□□□ -0.08
CPSF3-203ENST00000475482 A0A0G2JN53 185 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 C1orf226A1L170 272 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 ASPDHA6ND91 283 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 TGFBR3LH3BV60 316 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 ME2P23368 584 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 CD96P40200 585 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 GPR143P51810 404 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 HSD17B7P56937 341 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 ELOAQ14241 798 aaKnown RBP14.52□□□□□ -0.09
CPSF3-203ENST00000475482 OR4F3Q6IEY1 312 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 MRM1Q6IN84 353 aaKnown RBP14.52□□□□□ -0.09
CPSF3-203ENST00000475482 NET1Q7Z628 596 aaPredicted RBP14.52□□□□□ -0.09
CPSF3-203ENST00000475482 TRIML2Q8N7C3 387 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 APCDD1LQ8NCL9 501 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 TMEM52Q8NDY8 209 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 OR8J3Q8NGG0 315 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 ADAMTS18Q8TE60 1221 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 UTP4Q969X6 686 aaKnown RBP14.52□□□□□ -0.09
CPSF3-203ENST00000475482 SCMH1Q96GD3 660 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 PANX1Q96RD7 426 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 CGREF1Q99674 301 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms