RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CCDC137Q6PK04 289 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 BTNL3Q6UXE8 466 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MRPL21Q7Z2W9 205 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 IQCHQ86VS3 1027 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 VRK2Q86Y07 508 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ARMC10Q8N2F6 343 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 FAM160A2Q8N612 972 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 DNAJB3Q8WWF6 145 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MRPS31Q92665 395 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TCEAL4Q96EI5 215 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SORCS2Q96PQ0 1159 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MTG2Q9H4K7 406 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SAR1AQ9NR31 198 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MPP6Q9NZW5 540 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 NUP210LQ5VU65 1888 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CDRT15L2A8MXV6 281 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 NPIPA2E9PIF3 369 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 H3BQ06 376 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 WWP2O00308 870 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PDXKO00764 312 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HSPA12AO43301 675 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 GLRA3O75311 464 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PSMD10O75832 226 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CLDN9O95484 217 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PTTG1O95997 202 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 AK1P00568 194 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MT-ATP6P00846 226 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF25P17030 456 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PTNP21246 168 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RPL10P27635 214 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SSTR2P30874 369 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 LTBRP36941 435 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 IFNGR2P38484 337 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SLC1A2P43004 574 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HLCSP50747 726 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 EFNA3P52797 238 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 BTG2P78543 158 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 FOXE3Q13461 319 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RAB39AQ14964 217 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZFP69Q49AA0 526 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF658BQ4V348 819 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 XAF1Q6GPH4 301 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM71Q6P5X7 295 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 AFTPHQ6ULP2 937 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF782Q6ZMW2 699 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 UBALD2Q8IYN6 164 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TNS4Q8IZW8 715 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ACBD4Q8NC06 268 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 BPIFB1Q8TDL5 484 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ACER1Q8TDN7 264 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CRYGNQ8WXF5 182 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ALG3Q92685 438 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RAB24Q969Q5 203 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RPL10LQ96L21 214 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PPP3R2Q96LZ3 170 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RANGRFQ9HD47 186 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 AHSPQ9NZD4 102 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 OR52A1Q9UKL2 312 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 TBC1D24Q9ULP9 559 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PAPPA2Q9BXP8 1791 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CLDN25C9JDP6 229 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 E7ESA3 106 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 E9PQ18 207 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 M0QYT0 321 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF749O43361 778 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SDC3O75056 442 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CPNE3O75131 537 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 LAMP2P13473 410 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CD27P26842 260 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF143P52747 638 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PLA2G16P53816 162 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HTRA4P83105 476 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 DGCR6Q14129 220 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PSG3Q16557 428 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HACD4Q5VWC8 232 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 GDF6Q6KF10 455 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CES5AQ6NT32 575 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 Q6ZNB5 142 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RHOT1Q8IXI2 618 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 OR2M7Q8NG81 312 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PPP1R14AQ96A00 147 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CCDC124Q96CT7 223 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CMTM7Q96FZ5 175 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 DCUN1D1Q96GG9 259 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MGME1Q9BQP7 344 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RNF32Q9H0A6 362 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CDT1Q9H211 546 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 KIR3DX1Q9H7L2 352 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 FKRPQ9H9S5 495 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CTPS2Q9NRF8 586 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RIMS3Q9UJD0 308 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PCDHA2Q9Y5H9 948 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 BAZ2BQ9UIF8 2168 aaKnown RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CHST10O43529 356 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SPRY1O43609 319 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HCN1O60741 890 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 FBXO24O75426 580 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms