RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 ZNF615Q8N8J6 731 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 SMPDL3BQ92485 455 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 ISL2Q96A47 359 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 BRINP2Q9C0B6 783 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 NXF5Q9H1B4 397 aaKnown RBP12.74□□□□□ -0.37
CCDC78-209ENST00000474647 SERHLQ9NQF3 203 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 BCAP29Q9UHQ4 241 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 H0YIV9 168 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 H7C1Q1 480 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 SNPHO15079 494 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 SMPD2O60906 423 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 CDH16O75309 829 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 PPM1BO75688 479 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 LY6G6DO95868 133 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 ABCB1P08183 1280 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 CNTFP26441 200 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 PCSK6P29122 969 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 XKP51811 444 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 DIO3P55073 304 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 IRF9Q00978 393 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 PLCXD2Q0VAA5 305 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 GTF2H2Q13888 395 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 EXOSC7Q15024 291 aaKnown RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 GRTP1Q5TC63 336 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 GTF2H2CQ6P1K8 395 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 C3orf62Q6ZUJ4 267 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 GOLGA7Q7Z5G4 137 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 IFNEQ86WN2 208 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 CXorf67Q86X51 503 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 KCTD4Q8WVF5 259 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 OMA1Q96E52 524 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 ARSGQ96EG1 525 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 NODALQ96S42 347 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 ITPAQ9BY32 194 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 IPPKQ9H8X2 491 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 UBTD1Q9HAC8 227 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 GRHL1Q9NZI5 618 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 WHRNQ9P202 907 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 NDRG3Q9UGV2 375 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
CCDC78-209ENST00000474647 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 TSC22D4Q9Y3Q8 395 aa12.73□□□□□ -0.37
CCDC78-209ENST00000474647 ICOSLGO75144 302 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC78-209ENST00000474647 RCBTB2O95199 551 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 MTHFD2P13995 350 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CPMP14384 443 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CPN1P15169 458 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CRABP2P29373 138 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 SLC30A6Q6NXT4 461 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 GRAMD2AQ8IUY3 354 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 TRIM42Q8IWZ5 723 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
CCDC78-209ENST00000474647 C17orf47Q8NEP4 570 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 OR7G1Q8NGA0 311 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 WDR20Q8TBZ3 569 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 Q96MF0 132 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 CPSF2Q9P2I0 782 aaKnown RBP12.72□□□□□ -0.37
CCDC78-209ENST00000474647 PACSIN3Q9UKS6 424 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 ACOT9Q9Y305 439 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
CCDC78-209ENST00000474647 ESYT3A0FGR9 886 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 GOLGA6L10A6NI86 522 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 UGDHO60701 494 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 ERAL1O75616 437 aaKnown RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 SIX3O95343 332 aaPredicted RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 KLK1P06870 262 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PORP16435 677 aaPredicted RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PTGDSP41222 190 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 STARP49675 285 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 ALDH18A1P54886 795 aaKnown RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 GPX6P59796 221 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 CCNYL2Q5T2Q4 361 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 FAM111BQ6SJ93 734 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 NUP54Q7Z3B4 507 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 P4HA3Q7Z4N8 544 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 CCDC25Q86WR0 208 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PRIMA1Q86XR5 153 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 ADCY4Q8NFM4 1077 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 WNT2BQ93097 391 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 HGDQ93099 445 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 ATP6V1E2Q96A05 226 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 PERPQ96FX8 193 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms