RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SNX4O95219 450 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 HPNP05981 417 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 ENO1P06733 434 aaKnown RBP16.99■□□□□ 0.31
COL7A1-209ENST00000474432 NAGAP17050 411 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 MSX1P28360 303 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 HMOX2P30519 316 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 SSTR2P30874 369 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 ALDH9A1P49189 494 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 CDK9P50750 372 aaKnown RBP16.99■□□□□ 0.31
COL7A1-209ENST00000474432 CRYZQ08257 329 aaKnown RBP16.99■□□□□ 0.31
COL7A1-209ENST00000474432 CEBPEQ15744 281 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 WLSQ5T9L3 541 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 TMEM198Q66K66 360 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 TMEM81Q6P7N7 255 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 ZYG11AQ6WRX3 759 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 EIF1ADQ8N9N8 165 aaKnown RBP16.99■□□□□ 0.31
COL7A1-209ENST00000474432 OR52R1Q8NGF1 315 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 ZNF675Q8TD23 568 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 C16orf78Q8WTQ4 265 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 GNRHR2Q96P88 292 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 NODALQ96S42 347 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 FAIM2Q9BWQ8 316 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 C12orf65Q9H3J6 166 aaKnown RBP16.99■□□□□ 0.31
COL7A1-209ENST00000474432 BCAP29Q9UHQ4 241 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 UTS2RQ9UKP6 389 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 PSME2Q9UL46 239 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 C15orf41Q9Y2V0 281 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 PCDHGB3Q9Y5G1 929 aa16.99■□□□□ 0.31
COL7A1-209ENST00000474432 DRD2P14416 443 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 DRD5P21918 477 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 GDF1P27539 372 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 TIA1P31483 386 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL7A1-209ENST00000474432 TMED10P49755 219 aaKnown RBP16.98■□□□□ 0.31
COL7A1-209ENST00000474432 NRG3P56975 720 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 ULK2Q8IYT8 1036 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 CCDC116Q8IYX3 515 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL7A1-209ENST00000474432 TMEM41AQ96HV5 264 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 LCORQ96JN0 433 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-209ENST00000474432 EXO5Q9H790 373 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 KCNJ16Q9NPI9 418 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 STK38LQ9Y2H1 464 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 GPR55Q9Y2T6 319 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-209ENST00000474432 ZNF780BQ9Y6R6 833 aa16.98■□□□□ 0.31
COL7A1-209ENST00000474432 TO15178 435 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 PLIN3O60664 434 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 UGT2B11O75310 529 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 GLRA3O75311 464 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 HOXD4P09016 255 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-209ENST00000474432 PTPN6P29350 595 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 PPICP45877 212 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 ZFP36L2P47974 494 aaKnown RBP16.97■□□□□ 0.31
COL7A1-209ENST00000474432 DLX5P56178 289 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 SPIN4Q56A73 249 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 C6orf163Q5TEZ5 329 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 TIGD3Q6B0B8 471 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 NUP54Q7Z3B4 507 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 TDRPQ86YL5 185 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 DMRTC2Q8IXT2 367 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-209ENST00000474432 CCNYL1Q8N7R7 359 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 OR10Q1Q8NGQ4 319 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 OMA1Q96E52 524 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 HSPBAP1Q96EW2 488 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 TIMP4Q99727 224 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 EBPLQ9BY08 206 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 L2HGDHQ9H9P8 463 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 MID1IP1Q9NPA3 183 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 ALKBH4Q9NXW9 302 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 B4GALT7Q9UBV7 327 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 EXO1Q9UQ84 846 aaKnown RBP16.97■□□□□ 0.31
COL7A1-209ENST00000474432 CFL2Q9Y281 166 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 SPG11Q96JI7 2443 aa16.97■□□□□ 0.31
COL7A1-209ENST00000474432 ANKRD17O75179 2603 aaKnown RBP16.96■□□□□ 0.31
COL7A1-209ENST00000474432 ACOX3O15254 700 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 CT45A8P0DMV1 189 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 CT45A9P0DMV2 189 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 GABRA1P14867 456 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 ELAVL4P26378 380 aaKnown RBP16.96■□□□□ 0.31
COL7A1-209ENST00000474432 SLCO1A2P46721 670 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 NAGLUP54802 743 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 TLE4Q04727 773 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 BTKQ06187 659 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 ACSM2AQ08AH3 577 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 EIPR1Q53HC9 387 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 CT45A2Q5DJT8 189 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 DCST1Q5T197 706 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 RIPPLY2Q5TAB7 128 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 ACSM2BQ68CK6 577 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 VASNQ6EMK4 673 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 POMZP3Q6PJE2 187 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 FRMD7Q6ZUT3 714 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 NAXEQ8NCW5 288 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 OR9A2Q8NGT5 310 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 KAT2AQ92830 837 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 EXOSC8Q96B26 276 aaKnown RBP16.96■□□□□ 0.31
COL7A1-209ENST00000474432 MCCC2Q9HCC0 563 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 SLC35C2Q9NQQ7 365 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 EHD3Q9NZN3 535 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 SLC6A5Q9Y345 797 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 CCL27Q9Y4X3 112 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms