RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 SDHDO14521 159 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 ERN1O75460 977 aaKnown RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 FBXO45P0C2W1 286 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 DRD5P21918 477 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 EPHA3P29320 983 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 EMDP50402 254 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 PMP22Q01453 160 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 SRSF11Q05519 484 aaKnown RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 NNATQ16517 81 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 ZNF791Q3KP31 576 aaPredicted RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 ZNF385BQ569K4 471 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 GK5Q6ZS86 529 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 LARP4Q71RC2 724 aaKnown RBP eCLIP12.69□□□□□ -0.38
USF1-205ENST00000473969 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 OR7G2Q8NG99 324 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 OR7A2PQ8NGA2 310 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 OR5M3Q8NGP4 307 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 NR4A3Q92570 626 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 MAGEB18Q96M61 343 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 TAAR6Q96RI8 345 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 ZBTB18Q99592 522 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 DUSP26Q9BV47 211 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 NXF5Q9H1B4 397 aaKnown RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 WDR55Q9H6Y2 383 aaPredicted RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 ANKRA2Q9H9E1 313 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 FOLH1BQ9HBA9 442 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 ZNF446Q9NWS9 450 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 CNIH4Q9P003 139 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 C19orf53Q9UNZ5 99 aaPredicted RBP12.69□□□□□ -0.38
USF1-205ENST00000473969 OR10H1Q9Y4A9 318 aa12.69□□□□□ -0.38
USF1-205ENST00000473969 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 FRG2CA6NGY1 282 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ACOT7O00154 380 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 TFECO14948 347 aaPredicted RBP12.68□□□□□ -0.38
USF1-205ENST00000473969 CFLARO15519 480 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 DIAPH2O60879 1101 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 IFI6P09912 130 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 LAMP1P11279 417 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 EDN3P14138 238 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ZNF24P17028 368 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 NAGAP17050 411 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 GNLYP22749 145 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ABCD3P28288 659 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 PRKAG1P54619 331 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 DIO3P55073 304 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 GPR85P60893 370 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 KCNJ2P63252 427 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 PRR5P85299 388 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 RBPJQ06330 500 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 NTRK2Q16620 822 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 SPDYE7PQ495Y7 208 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 VPS26BQ4G0F5 336 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 OGFOD2Q6N063 350 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 TMEM64Q6YI46 380 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ACAD11Q709F0 780 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ZNF227Q86WZ6 799 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 PRR22Q8IZ63 422 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 OR2L13Q8N349 312 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 CPSF7Q8N684 471 aaKnown RBP12.68□□□□□ -0.38
USF1-205ENST00000473969 KRTCAP2Q8N6L1 136 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ST6GALNAC3Q8NDV1 305 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 CKAP2Q8WWK9 683 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 OR5P2Q8WZ92 322 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 DIO2Q92813 273 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 COQ8BQ96D53 544 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 FAM173AQ9BQD7 235 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 BHLHE41Q9C0J9 482 aaPredicted RBP12.68□□□□□ -0.38
USF1-205ENST00000473969 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 SEC14L3Q9UDX4 400 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 MRTO4Q9UKD2 239 aaKnown RBP12.68□□□□□ -0.38
USF1-205ENST00000473969 PCDHGB4Q9UN71 923 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 DTX4Q9Y2E6 619 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 SNX8Q9Y5X2 465 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
USF1-205ENST00000473969 ASPDHA6ND91 283 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 UPK1AO00322 258 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 EMC8O43402 210 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 REM1O75628 298 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 TGDSO95455 350 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 IL12BP29460 328 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 C21orf58P58505 322 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms