RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TSPYL5Q86VY4 417 aaPredicted RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 SAMD14Q8IZD0 417 aaPredicted RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 SLC5A8Q8N695 610 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 PIK3C3Q8NEB9 887 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 BBS10Q8TAM1 723 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 TANKQ92844 425 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 CCDC74AQ96AQ1 378 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 MMABQ96EY8 250 aaPredicted RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 ZNF354BQ96LW1 612 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 ZNF347Q96SE7 839 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 FEVQ99581 238 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 NUDT22Q9BRQ3 303 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 BCL2L10Q9HD36 194 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 PRDM9Q9NQV7 894 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 MAU2Q9Y6X3 613 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 LOC100130705A0A1B0GUX0 176 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 AGRPO00253 132 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 JRKO75564 520 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 CLPTM1O96005 669 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 BTG2P78543 158 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 KCNC4Q03721 635 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 CCNJQ5T5M9 372 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 ZNF555Q8NEP9 628 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 MRPS26Q9BYN8 205 aaKnown RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 CLK4Q9HAZ1 481 aaKnown RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 KRT84Q9NSB2 600 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 AASSQ9UDR5 926 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 C19orf53Q9UNZ5 99 aaPredicted RBP16.84■□□□□ 0.29
VARS2-206ENST00000473916 ORC6Q9Y5N6 252 aa16.84■□□□□ 0.29
VARS2-206ENST00000473916 PATE3B3GLJ2 98 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 TMEM150CB9EJG8 249 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 H3BMH7 237 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 DUX1O43812 170 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 PCDHGA12O60330 932 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 SERPINB7O75635 380 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 ITGA2P17301 1181 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 LIMS1P48059 325 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 CLK3P49761 638 aaKnown RBP16.83■□□□□ 0.28
VARS2-206ENST00000473916 ANXA11P50995 505 aaKnown RBP16.83■□□□□ 0.28
VARS2-206ENST00000473916 RAD23AP54725 363 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 DUSP8Q13202 625 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 HLA-BQ31612 363 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 MLIPQ5VWP3 458 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 TCTN3Q6NUS6 607 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 CDC73Q6P1J9 531 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 C16orf62Q7Z3J2 963 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 TMPRSS9Q7Z410 1059 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 OR10G2Q8NGC3 310 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 ADAMTS15Q8TE58 950 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 GIPC3Q8TF64 312 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 EDAQ92838 391 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 GIN1Q9NXP7 522 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 PTGFRNQ9P2B2 879 aa16.83■□□□□ 0.28
VARS2-206ENST00000473916 LY6G6EA0A0G2JKS1 128 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 HRKO00198 91 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 ASNA1O43681 348 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 HYAL3O43820 417 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 OR6B1O95007 311 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 NSA2O95478 260 aaKnown RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 RNH1P13489 461 aaKnown RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 RHCEP18577 417 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 SLC13A2Q13183 592 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 RAPSNQ13702 412 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 NDUFA9Q16795 377 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 MEP1AQ16819 746 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 FAM214AQ32MH5 1076 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 TTC23Q5W5X9 447 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 Q6ZPB1 254 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 VRK2Q86Y07 508 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 KRT73Q86Y46 540 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 C8orf59Q8N0T1 100 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 TMEM105Q8N8V8 129 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 NIPSNAP1Q9BPW8 284 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 MKLN1Q9UL63 735 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 ATXN7L1Q9ULK2 861 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 FAM32AQ9Y421 112 aaKnown RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 CLDN16Q9Y5I7 305 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 U3KQA8 63 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 CENPVL1A0A0U1RR11 272 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 A8MVJ9 347 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 BCKDKO14874 412 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 FRS3O43559 492 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 GADD45GO95257 159 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 CFIP05156 583 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 FOLR1P15328 257 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 MAOAP21397 527 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 MAGEA8P43361 318 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 EPS8Q12929 822 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 FAM53BQ14153 422 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 GUSBP11Q6P575 273 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 PIK3R3Q92569 461 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 SGCDQ92629 289 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 CD180Q99467 661 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 PRR14Q9BWN1 585 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 KCND3Q9UK17 655 aa16.82■□□□□ 0.28
VARS2-206ENST00000473916 GPR55Q9Y2T6 319 aaPredicted RBP16.82■□□□□ 0.28
VARS2-206ENST00000473916 CHST2Q9Y4C5 530 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms