RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 LRTM1Q9HBL6 345 aa14.34□□□□□ -0.11
MRPL55-226ENST00000473066 C1orf109Q9NX04 203 aa14.34□□□□□ -0.11
MRPL55-226ENST00000473066 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
MRPL55-226ENST00000473066 CNOT11Q9UKZ1 510 aaKnown RBP14.34□□□□□ -0.11
MRPL55-226ENST00000473066 WBP11Q9Y2W2 641 aaKnown RBP14.34□□□□□ -0.11
MRPL55-226ENST00000473066 FIGNL2A6NMB9 653 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 RGS16O15492 202 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-226ENST00000473066 COQ9O75208 318 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 PPM1BO75688 479 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 CBX7O95931 251 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 IGHG3P01860 377 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TUBBP07437 444 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 NAGAP17050 411 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 S1PR1P21453 382 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 GDF1P27539 372 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 ALDH3A1P30838 453 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 KRT20P35900 424 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 MGAT2Q10469 447 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 FOXO1Q12778 655 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TRMT12Q53H54 448 aaKnown RBP14.33□□□□□ -0.12
MRPL55-226ENST00000473066 ZNF628Q5EBL2 1059 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 NOXRED1Q6NXP6 359 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TRILQ7L0X0 811 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 PACS2Q86VP3 889 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TICAM1Q8IUC6 712 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 DDIASQ8IXT1 998 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 PPP1R14CQ8TAE6 165 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 SPPL2AQ8TCT8 520 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 KAT2AQ92830 837 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 SARAFQ96BY9 339 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 OMA1Q96E52 524 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 C11orf24Q96F05 449 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-226ENST00000473066 RILPQ96NA2 401 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 MECRQ9BV79 373 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 PARD6BQ9BYG5 372 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 STMN4Q9H169 189 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 QPCTLQ9NXS2 382 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 ZNF639Q9UID6 485 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 DTX4Q9Y2E6 619 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 LIPGQ9Y5X9 500 aa14.33□□□□□ -0.12
MRPL55-226ENST00000473066 TRGV5A0A0B4J1U4 118 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 ANKRD33BA6NCL7 494 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 FRG2CA6NGY1 282 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 AQP7O14520 342 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 HNRNPRO43390 633 aaKnown RBP14.32□□□□□ -0.12
MRPL55-226ENST00000473066 HCN1O60741 890 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 SLITRK5O94991 958 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 SNX4O95219 450 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 CLDN14O95500 239 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 PRPH2P23942 346 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 SERPINB5P36952 375 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 PPICP45877 212 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 NCBP2P52298 156 aaKnown RBP eCLIP14.32□□□□□ -0.12
MRPL55-226ENST00000473066 RPL38P63173 70 aaKnown RBP14.32□□□□□ -0.12
MRPL55-226ENST00000473066 PSPHP78330 225 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 ZNF155Q12901 538 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-226ENST00000473066 WLSQ5T9L3 541 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 FAM71E1Q6IPT2 247 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 CCT7Q99832 543 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 TMEM109Q9BVC6 243 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 KLRF1Q9NZS2 232 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 ACAD8Q9UKU7 415 aa14.32□□□□□ -0.12
MRPL55-226ENST00000473066 LRRC3CA6NJW4 275 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 SUSD5O60279 629 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 ERN1O75460 977 aaKnown RBP14.31□□□□□ -0.12
MRPL55-226ENST00000473066 JUNP05412 331 aaKnown RBP14.31□□□□□ -0.12
MRPL55-226ENST00000473066 CELA3AP09093 270 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 MYZAPP0CAP1 466 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DDX5P17844 614 aaKnown RBP14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DRD5P21918 477 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 HTR1EP28566 365 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 IL12BP29460 328 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DUSP8Q13202 625 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 TOMM20Q15388 145 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 CEBPEQ15744 281 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 SH2D4BQ5SQS7 431 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 KANK2Q63ZY3 851 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 ZNF585AQ6P3V2 769 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 RNF165Q6ZSG1 346 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 NCCRP1Q6ZVX7 275 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-226ENST00000473066 NUP54Q7Z3B4 507 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 ZFP28Q8NHY6 868 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 TWIST2Q8WVJ9 160 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 SDCCAG3Q96C92 435 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DMRTA2Q96SC8 542 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 OSBPL11Q9BXB4 747 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 CENPHQ9H3R5 247 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 DDX18Q9NVP1 670 aaKnown RBP14.31□□□□□ -0.12
MRPL55-226ENST00000473066 TAS2R9Q9NYW1 312 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 TMED5Q9Y3A6 229 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 OR10H1Q9Y4A9 318 aa14.31□□□□□ -0.12
MRPL55-226ENST00000473066 PTGDR2Q9Y5Y4 395 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms