RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 LHX4Q969G2 390 aa4.79□□□□□ -1.64
SGCE-210ENST00000472326 OR4F4Q96R69 305 aa4.79□□□□□ -1.64
SGCE-210ENST00000472326 TSPY26PQ9H489 355 aa4.79□□□□□ -1.64
SGCE-210ENST00000472326 KCNMB3Q9NPA1 279 aa4.79□□□□□ -1.64
SGCE-210ENST00000472326 ARGLU1Q9NWB6 273 aaPredicted RBP4.79□□□□□ -1.64
SGCE-210ENST00000472326 ENTPD4Q9Y227 616 aa4.79□□□□□ -1.64
SGCE-210ENST00000472326 GOSR1O95249 250 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
SGCE-210ENST00000472326 P0C879 139 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 ACP1P24666 158 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 DRD3P35462 400 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 RGRP47804 291 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 NPY2RP49146 381 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 ASAH1Q13510 395 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 RFTN1Q14699 578 aaPredicted RBP4.78□□□□□ -1.64
SGCE-210ENST00000472326 KIAA0040Q15053 153 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 CMPK2Q5EBM0 449 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 TOM1L2Q6ZVM7 507 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.78□□□□□ -1.64
SGCE-210ENST00000472326 OR52J3Q8NH60 311 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 HIST1H2ACQ93077 130 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 DEFB118Q96PH6 123 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 APOOQ9BUR5 198 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 TMEM245Q9H330 911 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 MIEF1Q9NQG6 463 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 PLSCR3Q9NRY6 295 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 COPS7AQ9UBW8 275 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 NPC1L1Q9UHC9 1359 aa4.78□□□□□ -1.64
SGCE-210ENST00000472326 SYNJ2O15056 1496 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 G3V3Y1 287 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 TYROBPO43914 113 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 PTPN4P29074 926 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 POU3F4P49335 361 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 CNN1P51911 297 aaKnown RBP4.77□□□□□ -1.65
SGCE-210ENST00000472326 ATRAIDQ6UW56 229 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 C9orf85Q96MD7 179 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 TRPV6Q9H1D0 765 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 NTNG1Q9Y2I2 539 aa4.77□□□□□ -1.65
SGCE-210ENST00000472326 KLF2Q9Y5W3 355 aaPredicted RBP4.77□□□□□ -1.65
SGCE-210ENST00000472326 A0A0J9YVX5 310 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 A0A0U1RQG5 324 aaPredicted RBP4.76□□□□□ -1.65
SGCE-210ENST00000472326 MFSD2BA6NFX1 497 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 HDAC3O15379 428 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 CFLARO15519 480 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 LRP3O75074 770 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 SYNGR4O95473 234 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 SLC2A10O95528 541 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 CXCL14O95715 111 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 CCZ1BP86790 482 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
SGCE-210ENST00000472326 ZIC1Q15915 447 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 CCDC184Q52MB2 194 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 C1QTNF12Q5T7M4 302 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 ZNF544Q6NX49 715 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 SNX21Q969T3 373 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 FAF2Q96CS3 445 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 DTD2Q96FN9 168 aa4.76□□□□□ -1.65
SGCE-210ENST00000472326 NPIPA5A0A0B4J1W7 369 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 NPIPA5E9PKD4 350 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.75□□□□□ -1.65
SGCE-210ENST00000472326 KINO60870 393 aaKnown RBP4.75□□□□□ -1.65
SGCE-210ENST00000472326 ECDO95905 644 aaPredicted RBP4.75□□□□□ -1.65
SGCE-210ENST00000472326 ATP6V1B1P15313 513 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 CCL11P51671 97 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 ERVPABLB-1P60509 514 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 PRKCEQ02156 737 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 SERTAD2Q14140 314 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 ISXQ2M1V0 245 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 GPR137CQ8N3F9 429 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 TMEM37Q8WXS4 190 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 SLCO4A1Q96BD0 722 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 CYYR1Q96J86 154 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 ZNF560Q96MR9 790 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 SLC2A6Q9UGQ3 507 aa4.75□□□□□ -1.65
SGCE-210ENST00000472326 MACROD2A1Z1Q3 448 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 LCMT2O60294 686 aaKnown RBP4.74□□□□□ -1.65
SGCE-210ENST00000472326 HOXB7P09629 217 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 CT45A10P0DMU9 189 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 GHRP10912 638 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 ZNF18P17022 549 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 MARCKSP29966 332 aaPredicted RBP4.74□□□□□ -1.65
SGCE-210ENST00000472326 OR1D4P47884 311 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 CD47Q08722 323 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 HFEQ30201 348 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 SLC22A10Q63ZE4 541 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 ZNF677Q86XU0 584 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 PSMA8Q8TAA3 256 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 CCDC26Q8TAB7 109 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 ZNF564Q8TBZ8 553 aaPredicted RBP4.74□□□□□ -1.65
SGCE-210ENST00000472326 FNDC8Q8TC99 324 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 KRT35Q92764 455 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 SPATA13Q96N96 652 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 ALG9Q9H6U8 611 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 HPS4Q9NQG7 708 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 KLRF1Q9NZS2 232 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 MIOXQ9UGB7 285 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 ABCG2Q9UNQ0 655 aa4.74□□□□□ -1.65
SGCE-210ENST00000472326 RPH3AQ9Y2J0 694 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms