RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HLA-DPA1P20036 260 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 MAPK3P27361 379 aaPredicted RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 GJB2P29033 226 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 HSD17B2P37059 387 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 IER3P46695 156 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 IFNAR2P48551 515 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SULT1E1P49888 294 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 ETV1P50549 477 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 TKTL1P51854 596 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 MFAP2P55001 183 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 NUCB2P80303 420 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SLC3A1Q07837 685 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 MFGE8Q08431 387 aaPredicted RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 TFCP2Q12800 502 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SLC10A1Q14973 349 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 CLPPQ16740 277 aaPredicted RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 IMMTQ16891 758 aaKnown RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 RAB12Q6IQ22 244 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 CYP4V2Q6ZWL3 525 aaPredicted RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 SPATA24Q86W54 205 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 C17orf64Q86WR6 236 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 OR8H3Q8N146 312 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 Q8N9L7 120 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 GOLGA5Q8TBA6 731 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SHC3Q92529 594 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 NAP1L3Q99457 506 aaPredicted RBP2.96□□□□□ -1.94
CD46-213ENST00000471987 CRACR2AQ9BSW2 395 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 PLEK2Q9NYT0 353 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SPATA7Q9P0W8 599 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 CIDEBQ9UHD4 219 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 TMED5Q9Y3A6 229 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 MROH5Q6ZUA9 1318 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 A8MX80 341 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 KBTBD13C9JR72 458 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 PANO1I0J062 215 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 SGK1O00141 431 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CETN3O15182 167 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 RNF113AO15541 343 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 RIPK2O43353 540 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 SELENOFO60613 162 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 NOL3O60936 208 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 TRIM16O95361 564 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 ASNSP08243 561 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 LAMP1P11279 417 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 GLRA1P23415 457 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 SOX6P35712 828 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 ATP5OP48047 213 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 SLC26A5P58743 744 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CCNA1P78396 465 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 GBE1Q04446 702 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 ASAH1Q13510 395 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 STK11Q15831 433 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 QRICH1Q2TAL8 776 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 ZNF658BQ4V348 819 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 UNC50Q53HI1 259 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 ZNF658Q5TYW1 1059 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 C1orf189Q5VU69 101 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 METTL11BQ5VVY1 283 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 TPGS2Q68CL5 300 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 SNRNP48Q6IEG0 339 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 FAM47EQ6ZV65 393 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 EFCAB13Q8IY85 973 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 FBXW8Q8N3Y1 598 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 TRIML2Q8N7C3 387 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 Q8N9G6 341 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 SPC24Q8NBT2 197 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CCDC197Q8NCU1 140 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CHDHQ8NE62 594 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 NFAM1Q8NET5 270 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 OR6C4Q8NGE1 309 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 OR13F1Q8NGS4 319 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 OR4F5Q8NH21 305 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 PIWIL1Q96J94 861 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 RAB3IPQ96QF0 476 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 IDI2Q9BXS1 227 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 LSG1Q9H089 658 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 OR10A4Q9H209 315 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 LIN28AQ9H9Z2 209 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 MRPL17Q9NRX2 175 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 DDX18Q9NVP1 670 aaKnown RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 TAS2R16Q9NYV7 291 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 UBAP1Q9NZ09 502 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 CHMP5Q9NZZ3 219 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 TEKT2Q9UIF3 430 aa2.95□□□□□ -1.94
CD46-213ENST00000471987 V9GYY5 206 aaPredicted RBP2.95□□□□□ -1.94
CD46-213ENST00000471987 GAKO14976 1311 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 EVC2Q86UK5 1308 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 CLRN2A0PK11 232 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 TRABD2BA6NFA1 517 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 SLC15A5A6NIM6 579 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 L7N2F9 121 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 DDX39AO00148 427 aaKnown RBP2.94□□□□□ -1.94
CD46-213ENST00000471987 SEC22BO75396 215 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ERLIN1O75477 346 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ANXA9O76027 345 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ADCY5O95622 1261 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 HEXBP07686 556 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 SBK2P0C263 348 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 MTIF2P46199 727 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms