RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IMPDH1P20839 514 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 GCKP35557 465 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 KRT6CP48668 564 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 DNASE1L1P49184 302 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 TMED10P49755 219 aaKnown RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 GALNT1Q10472 559 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 GXYLT1Q4G148 440 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF678Q5SXM1 525 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 HLA-DQA1Q5Y7H0 255 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SLC48A1Q6P1K1 146 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 C3P1Q6ZMU1 363 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ACAD11Q709F0 780 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 TRILQ7L0X0 811 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF441Q8N8Z8 693 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 FAM13CQ8NE31 585 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SREK1Q8WXA9 508 aaKnown RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 RND1Q92730 232 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SARAFQ96BY9 339 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SDCCAG3Q96C92 435 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 FAM111AQ96PZ2 611 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF382Q96SR6 550 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SECISBP2Q96T21 854 aaKnown RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SPOCK3Q9BQ16 436 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 OR10A5Q9H207 317 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 DCLRE1BQ9H816 532 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZFP64Q9NPA5 681 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 TUBA8Q9NY65 449 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 TMEM216Q9P0N5 145 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 VPS29Q9UBQ0 182 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 DCDC2Q9UHG0 476 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 CES1P1Q9UKY3 287 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 CFL2Q9Y281 166 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 PCDHGB3Q9Y5G1 929 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 HRH3Q9Y5N1 445 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 CHCHD2Q9Y6H1 151 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
HMGN1-211ENST00000471260 CENPEQ02224 2701 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 CACNA1CQ13936 2221 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 EML6Q6ZMW3 1958 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 FIGNL2A6NMB9 653 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 NPIPA2E9PIF3 369 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 NPIPA3F8WFD2 350 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 G3V3Y1 287 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 PPP6CO00743 305 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 TP53I11O14683 189 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 PEX11AO75192 247 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 SNNO75324 88 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-211ENST00000471260 OR4F21O95013 312 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 CLPSP04118 112 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 ATP1B1P05026 303 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 HOXD4P09016 255 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-211ENST00000471260 CHRNB4P30926 498 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 SSTR4P31391 388 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 PIGAP37287 484 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 MAGEA5P43359 124 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 PRKAA2P54646 552 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 NRG3P56975 720 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 NAA20P61599 178 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 RPP38P78345 283 aaKnown RBP12.42□□□□□ -0.42
HMGN1-211ENST00000471260 OCRLQ01968 901 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 MAP4K2Q12851 820 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
HMGN1-211ENST00000471260 UNC50Q53HI1 259 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 SGO1Q5FBB7 561 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 EMC4Q5J8M3 183 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF615Q8N8J6 731 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 STON2Q8WXE9 905 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 UCN3Q969E3 161 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 TM4SF18Q96CE8 201 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 NSL1Q96IY1 281 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 FAIM2Q9BWQ8 316 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 ENKD1Q9H0I2 346 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 LDAHQ9H6V9 325 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 ACKR4Q9NPB9 350 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 FARSBQ9NSD9 589 aaKnown RBP12.42□□□□□ -0.42
HMGN1-211ENST00000471260 HAO1Q9UJM8 370 aa12.42□□□□□ -0.42
HMGN1-211ENST00000471260 TRGV5A0A0B4J1U4 118 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 DLX3O60479 287 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 WDR1O75083 606 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 ULK1O75385 1050 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 SNX4O95219 450 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CT62P0C5K7 136 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 NAGAP17050 411 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 TSPAN8P19075 237 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CSNK2A2P19784 350 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 NT5EP21589 574 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 NR0B1P51843 470 aaKnown RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 RPS6KA2Q15349 733 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CDSNQ15517 529 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 DNAL1Q4LDG9 190 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 GPRIN3Q6ZVF9 776 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms