RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 COX20Q5RI15 118 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.8□□□□□ -0.68
FN1-217ENST00000471193 PLAG1Q6DJT9 500 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 CDC73Q6P1J9 531 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 RNF111Q6ZNA4 994 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 NDUFAF7Q7L592 441 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 C9orf40Q8IXQ3 194 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 LGI4Q8N135 537 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 C10orf111Q8N326 155 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 C16orf52Q8NHV5 167 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 VMP1Q96GC9 406 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 VPS50Q96JG6 964 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 IMMP1LQ96LU5 166 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 VSTM2LQ96N03 204 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 IP6K3Q96PC2 410 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 ACTRT3Q9BYD9 372 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 KAT8Q9H7Z6 458 aaKnown RBP10.8□□□□□ -0.68
FN1-217ENST00000471193 FOLH1BQ9HBA9 442 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 EQTNQ9NQ60 294 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 P4HTMQ9NXG6 502 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 PRODH2Q9UF12 536 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 BCAP29Q9UHQ4 241 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 FBXL4Q9UKA2 621 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 PRPF19Q9UMS4 504 aaKnown RBP10.8□□□□□ -0.68
FN1-217ENST00000471193 DTX4Q9Y2E6 619 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 AP3M1Q9Y2T2 418 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 L3MBTL1Q9Y468 752 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 HEMK1Q9Y5R4 338 aaPredicted RBP10.8□□□□□ -0.68
FN1-217ENST00000471193 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 CACNA1AO00555 2505 aa10.8□□□□□ -0.68
FN1-217ENST00000471193 AHCTF1Q8WYP5 2266 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 NSG1A0A0A6YYJ2 146 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ASNA1O43681 348 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 DNAJA2O60884 412 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 NME6O75414 186 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 DNAJC8O75937 253 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 ACP2P11117 423 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 BMP2P12643 396 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ETFAP13804 333 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 WT1P19544 449 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 MAP3K8P41279 467 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 MAN2A2P49641 1150 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ANXA11P50995 505 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 GZMMP51124 257 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 EEFSECP57772 596 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 EBPQ15125 230 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 CRTC2Q53ET0 693 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 TNFAIP8L2Q6P589 184 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 ZCCHC12Q6PEW1 402 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 NET1Q7Z628 596 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 SERPINA11Q86U17 422 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 CALHM3Q86XJ0 350 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ARHGAP24Q8N264 748 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 KIF2BQ8N4N8 673 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 HORMAD2Q8N7B1 307 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 AMER2Q8N7J2 671 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 CDRT4Q8N9R6 151 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 OR5D16Q8NGK9 328 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 FBXO30Q8TB52 745 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 C16orf58Q96GQ5 468 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 NAF1Q96HR8 494 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 BTBD9Q96Q07 612 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 LMF2Q9BU23 707 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 THUMPD3Q9BV44 507 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 ITPAQ9BY32 194 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 CADM1Q9BY67 442 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 DPH1Q9BZG8 443 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 OR51I1Q9H343 314 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ALG2Q9H553 416 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 CCDC86Q9H6F5 360 aaKnown RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 ZNF160Q9HCG1 818 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 ADA2Q9NZK5 511 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 FAF1Q9UNN5 650 aaPredicted RBP10.79□□□□□ -0.68
FN1-217ENST00000471193 CFL2Q9Y281 166 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 CROCCQ5TZA2 2017 aa10.79□□□□□ -0.68
FN1-217ENST00000471193 TRBV11-1A0A0K0K1C0 115 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 PRORSD1PA6NEY8 169 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 TTC36A6NLP5 189 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 FAM220BPB1ANY3 271 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 HMGN4O00479 90 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 PEX12O00623 359 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 NKX2-2O95096 273 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 CAPNS1P04632 268 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 MATN1P21941 496 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 CRATP43155 626 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 GSK3BP49841 420 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 CLCN2P51788 898 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 CASP9P55211 416 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 DSTNP60981 165 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 LIPEQ05469 1076 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 CEACAM7Q14002 265 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 MYBPC3Q14896 1274 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 BTBD16Q32M84 506 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 PIGGQ5H8A4 983 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 SAMD4BQ5PRF9 694 aaKnown RBP10.78□□□□□ -0.68
FN1-217ENST00000471193 GCNT6Q5T4J0 391 aa10.78□□□□□ -0.68
FN1-217ENST00000471193 NPSR1Q6W5P4 371 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms