RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 BZW1Q7L1Q6 419 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 OTOAQ7RTW8 1153 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 SNX20Q7Z614 316 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 LACC1Q8IV20 430 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 DCUN1D3Q8IWE4 304 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 CYP4Z2PQ8N1L4 340 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 RPRMLQ8N4K4 120 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 TMEM156Q8N614 296 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 NIPA2Q8N8Q9 360 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 AMER3Q8N944 861 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 MLKLQ8NB16 471 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 RERGQ96A58 199 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 LRRC45Q96CN5 670 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PERPQ96FX8 193 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 C10orf90Q96M02 699 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 SPATA13Q96N96 652 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PCDHB18PQ96TA0 734 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 AGPAT1Q99943 283 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 TSSK1BQ9BXA7 367 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 GANQ9H2C0 597 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 LCMT1Q9UIC8 334 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 SLC39A10Q9ULF5 831 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ICAM5Q9UMF0 924 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 TDRKHQ9Y2W6 561 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 NFS1Q9Y697 457 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 TENM1Q9UKZ4 2725 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 NBEAL2Q6ZNJ1 2754 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ARID1AO14497 2285 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 TMEM272A0A1B0GTI8 110 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 LOC285095A0A1B0GVY8 99 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 OR2A25A4D2G3 310 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SYNDIG1LA6NDD5 238 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 MAGEB17A8MXT2 336 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 CTSVO60911 334 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PDE9AO76083 593 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 NSA2O95478 260 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 PLAUP00749 431 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 GZMAP12544 262 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 EZRP15311 586 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 FERP16591 822 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 JAK1P23458 1154 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 EEF1GP26641 437 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 PDHA2P29803 388 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 CMPK1P30085 196 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PEBP1P30086 187 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 OPRM1P35372 400 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 TIMP3P35625 211 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 MLF1P58340 268 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SLC26A5P58743 744 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 TRIM14Q14142 442 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PTGR1Q14914 329 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SIX1Q15475 284 aaPredicted RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 TAF1AQ15573 450 aaPredicted RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 SLC1A5Q15758 541 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 ACKR1Q16570 336 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SFT2D3Q587I9 215 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SIRPB2Q5JXA9 342 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 OTUD3Q5T2D3 398 aaPredicted RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 MFSD4BQ5TF39 518 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 NXNQ6DKJ4 435 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 NIPAL1Q6NVV3 410 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SCIMPQ6UWF3 145 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PLEKHM3Q6ZWE6 761 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 VSIG1Q86XK7 387 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 GPATCH11Q8N954 259 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PPHLN1Q8NEY8 458 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 OR5M9Q8NGP3 310 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 GSDMBQ8TAX9 411 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 HMGCLL1Q8TB92 370 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 MAGEC3Q8TD91 643 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 BLOC1S5Q8TDH9 187 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 ELP5Q8TE02 316 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 TRMT61AQ96FX7 289 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 ZFP3Q96NJ6 502 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 OR1F2PQ96R84 312 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PANX2Q96RD6 677 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 VAT1Q99536 393 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 NPAS2Q99743 824 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 EBNA1BP2Q99848 306 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 FAM173AQ9BQD7 235 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 SF3B5Q9BWJ5 86 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 BEX2Q9BXY8 128 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PLA2G12AQ9BZM1 189 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 FAM129AQ9BZQ8 928 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 RBM38Q9H0Z9 239 aaKnown RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 CDCP1Q9H5V8 836 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 ZNF701Q9NV72 531 aaPredicted RBP4.29□□□□□ -1.72
VPS8-219ENST00000469479 ZNF226Q9NYT6 803 aa4.29□□□□□ -1.72
VPS8-219ENST00000469479 PHF3Q92576 2039 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms