RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ACOD1A6NK06 481 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RGS10O43665 173 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 FAM20BO75063 409 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RGS11O94810 467 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 LPLP06858 475 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 HCKP08631 526 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 MLNP12872 115 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ATP12AP54707 1039 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 MC2RQ01718 297 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CRYZQ08257 329 aaKnown RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 IER5LQ5T953 404 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CLEC6AQ6EIG7 209 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 C22orf39Q6P5X5 142 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 USP30Q70CQ3 517 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 AQP12AQ8IXF9 295 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SLC43A2Q8N370 569 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 BSCL2Q96G97 398 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 MYRFLQ96LU7 910 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 COL21A1Q96P44 957 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 P2RY13Q9BPV8 354 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 NMRAL1Q9HBL8 299 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 EQTNQ9NQ60 294 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 KCNK7Q9Y2U2 307 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 OR1A2Q9Y585 309 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 DMRT1Q9Y5R6 373 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 NPEPPSL1A6NEC2 478 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 NPIPB15A6NHN6 443 aaPredicted RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 KDELR3O43731 214 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 ORC5O43913 435 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SMPD2O60906 423 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 KAT7O95251 611 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SIX6O95475 246 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 EGFP01133 1207 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SSTR4P31391 388 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 HYAL1Q12794 435 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 AVPI1Q5T686 147 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TSTD2Q5T7W7 516 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 PAQR3Q6TCH7 311 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 AHSA2Q719I0 299 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SZRD1Q7Z422 152 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SVOPLQ8N434 492 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 GLYATL2Q8WU03 294 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 PKP4Q99569 1192 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 RIOK2Q9BVS4 552 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 ITPAQ9BY32 194 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 REEP4Q9H6H4 257 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TREM2Q9NZC2 230 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 BTNL2Q9UIR0 455 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 EMCNQ9ULC0 261 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 CLDN24A6NM45 220 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 GRID2O43424 1007 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 NFATC1O95644 943 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 RPLP0P05388 317 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 RORAP35398 523 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 GPR1P46091 355 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 NUDT6P53370 316 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 PLA2G7Q13093 441 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 FCN2Q15485 313 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 C18orf21Q32NC0 220 aaPredicted RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 VITQ6UXI7 678 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 CUZD1Q86UP6 607 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SERPINA9Q86WD7 417 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 HDDC3Q8N4P3 179 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TMBIM1Q969X1 311 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SFXN2Q96NB2 322 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 OR51E2Q9H255 320 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 MFSD1Q9H3U5 465 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 XKR8Q9H6D3 395 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 CACNA1IQ9P0X4 2223 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 UPK3BL1B0FP48 263 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 UPK3BL2E5RIL1 263 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 STX11O75558 287 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TSPAN19P0C672 248 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TIMP2P16035 220 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 ITPKAP23677 461 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 ATP5A1P25705 553 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 RING1Q06587 406 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 TSNQ15631 228 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 MPEG1Q2M385 716 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SPANXN3Q5MJ09 141 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 DEFB123Q8N688 67 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 OR11H4Q8NGC9 324 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 STK35Q8TDR2 534 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 ULK4Q96C45 1275 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 LINGO1Q96FE5 620 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 IMP4Q96G21 291 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 MS4A3Q96HJ5 214 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 EDEM2Q9BV94 578 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SUCNR1Q9BXA5 334 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 SEMA4CQ9C0C4 833 aa9.43□□□□□ -0.9
NUP50-214ENST00000469163 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
NUP50-214ENST00000469163 EVA1AQ9H8M9 152 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms