RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 NLNQ9BYT8 704 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 TSPY26PQ9H489 355 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 STARD5Q9NSY2 213 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 ENTPD4Q9Y227 616 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 RPH3AQ9Y2J0 694 aaPredicted RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 ZNF175Q9Y473 711 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 SYNJ2O15056 1496 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 NPIPA5A0A0B4J1W7 369 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 FRG2CA6NGY1 282 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 CCDC69A6NI79 296 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 NPIPA5E9PKD4 350 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 HIST1H2AGP0C0S8 130 aaPredicted RBP3.79□□□□□ -1.8
XRN1-207ENST00000468894 ZBTB25P24278 435 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 ACP1P24666 158 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 NPY2RP49146 381 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 GALK2Q01415 458 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 ZKSCAN8Q15776 578 aaPredicted RBP3.79□□□□□ -1.8
XRN1-207ENST00000468894 QRICH1Q2TAL8 776 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 HFEQ30201 348 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
XRN1-207ENST00000468894 BNIPLQ7Z465 357 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.79□□□□□ -1.8
XRN1-207ENST00000468894 UNC5CLQ8IV45 518 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 UBQLNLQ8IYU4 475 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 GPR137CQ8N3F9 429 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 OR4F17Q8NGA8 305 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 PSMA8Q8TAA3 256 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 FNDC8Q8TC99 324 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 HIST1H2ACQ93077 130 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 C9orf85Q96MD7 179 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 OR4F4Q96R69 305 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 ABCG4Q9H172 646 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 PRMT8Q9NR22 394 aaPredicted RBP3.79□□□□□ -1.8
XRN1-207ENST00000468894 NYAP2Q9P242 653 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 NTNG1Q9Y2I2 539 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 TEX264Q9Y6I9 313 aa3.79□□□□□ -1.8
XRN1-207ENST00000468894 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.78□□□□□ -1.8
XRN1-207ENST00000468894 EI24O14681 340 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 TNFSF11O14788 317 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 SYNGR4O95473 234 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 HMOX1P09601 288 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 P0C879 139 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 CT45A10P0DMU9 189 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 PTMSP20962 102 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 PTPN4P29074 926 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 OR1D4P47884 311 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 TSTA3Q13630 321 aaPredicted RBP3.78□□□□□ -1.8
XRN1-207ENST00000468894 ZNF528Q3MIS6 628 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 TATDN1Q6P1N9 297 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 CNTN4Q8IWV2 1026 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 KRT35Q92764 455 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 CASD1Q96PB1 797 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 CARD9Q9H257 536 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 ALDH8A1Q9H2A2 487 aaPredicted RBP3.78□□□□□ -1.8
XRN1-207ENST00000468894 IL17CQ9P0M4 197 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 MIOXQ9UGB7 285 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 NOL7Q9UMY1 257 aaKnown RBP3.78□□□□□ -1.8
XRN1-207ENST00000468894 PTPRUQ92729 1446 aa3.78□□□□□ -1.8
XRN1-207ENST00000468894 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 TYROBPO43914 113 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 SLC2A10O95528 541 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 APRTP07741 180 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 ABHD2P08910 425 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 HOXB7P09629 217 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 ALPIP09923 528 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 MARCKSP29966 332 aaPredicted RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 POU3F4P49335 361 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 ERVPABLB-1P60509 514 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 SMC1AQ14683 1233 aaKnown RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 KIAA0040Q15053 153 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 ZIC1Q15915 447 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 DLEU7Q6UYE1 221 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 TOM1L2Q6ZVM7 507 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 SLC34A3Q8N130 599 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 COLGALT1Q8NBJ5 622 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 RFESDQ8TAC1 157 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 SNX21Q969T3 373 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 FAF2Q96CS3 445 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 NUS1Q96E22 293 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 CYYR1Q96J86 154 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 DEFB118Q96PH6 123 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 OR5M11Q96RB7 305 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 MAPKAP1Q9BPZ7 522 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 APOOQ9BUR5 198 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 MID1IP1Q9NPA3 183 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 MIEF1Q9NQG6 463 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 COMMD8Q9NX08 183 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 COPS7AQ9UBW8 275 aa3.77□□□□□ -1.81
XRN1-207ENST00000468894 TRMT6Q9UJA5 497 aaKnown RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 PURGQ9UJV8 347 aaKnown RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 KLF2Q9Y5W3 355 aaPredicted RBP3.77□□□□□ -1.81
XRN1-207ENST00000468894 MACROD2A1Z1Q3 448 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 PDLIM1O00151 329 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 HDAC3O15379 428 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 NME2P1O60361 137 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 ECDO95905 644 aaPredicted RBP3.76□□□□□ -1.81
XRN1-207ENST00000468894 ZNF18P17022 549 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 RGRP47804 291 aa3.76□□□□□ -1.81
XRN1-207ENST00000468894 ALDH3B2P48448 385 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms