RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 RAD21L1Q9H4I0 556 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 TRIM45Q9H8W5 580 aaPredicted RBP10.47□□□□□ -0.73
MSH5-214ENST00000468602 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 DUSP22Q9NRW4 184 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 GID8Q9NWU2 228 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 THUMPD1Q9NXG2 353 aaKnown RBP10.47□□□□□ -0.73
MSH5-214ENST00000468602 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 SLC25A37Q9NYZ2 338 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 COPS7AQ9UBW8 275 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 CORO2BQ9UQ03 480 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 GPR55Q9Y2T6 319 aaPredicted RBP10.47□□□□□ -0.73
MSH5-214ENST00000468602 PCDHB14Q9Y5E9 798 aa10.47□□□□□ -0.73
MSH5-214ENST00000468602 HEMK1Q9Y5R4 338 aaPredicted RBP10.47□□□□□ -0.73
MSH5-214ENST00000468602 DMXL2Q8TDJ6 3036 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 C15orf38-AP3S2A0A0A6YYH1 394 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 DUXAA6NLW8 204 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 C9JVG2 144 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ACOX3O15254 700 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ATP5HO75947 161 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ZFAND5O76080 213 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 NKX2-2O95096 273 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 AGR2O95994 175 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ITGB2P05107 769 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 TNNI3P19429 210 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 OTX2P32243 289 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 CDKN2CP42773 168 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 PRIM2P49643 509 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 RNF4P78317 190 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 MRPS35P82673 323 aaKnown RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 PSG6Q00889 435 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SF3A3Q12874 501 aaKnown RBP eCLIP10.46□□□□□ -0.735e-6■■■■■ 26.9
MSH5-214ENST00000468602 BNIP1Q12981 228 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 HSPB3Q12988 150 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 GAB1Q13480 694 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 REP15Q6BDI9 236 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 FAM180BQ6P0A1 224 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 CDC73Q6P1J9 531 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SLC2A7Q6PXP3 512 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 IGFL2Q6UWQ7 119 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 TMEM107Q6UX40 140 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 HSDL2Q6YN16 418 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 BNC2Q6ZN30 1099 aaPredicted RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 CCDC81Q6ZN84 652 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 RNF111Q6ZNA4 994 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 NET1Q7Z628 596 aaPredicted RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 ARPINQ7Z6K5 226 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 DHDDSQ86SQ9 333 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ANKRD46Q86W74 232 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 C9orf40Q8IXQ3 194 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 KBTBD2Q8IY47 623 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 DND1Q8IYX4 353 aaKnown RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 METTL25Q8N6Q8 603 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 NUP43Q8NFH3 380 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ADCY4Q8NFM4 1077 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 OR52N2Q8NGI0 321 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 OR4A15Q8NGL6 344 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 C16orf52Q8NHV5 167 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ZCCHC14Q8WYQ9 949 aaKnown RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 NCLNQ969V3 563 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 LRRC58Q96CX6 371 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 HSPBAP1Q96EW2 488 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ANKRD27Q96NW4 1050 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SH3GL1Q99961 368 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SPATA9Q9BWV2 254 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 RNF32Q9H0A6 362 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 TPT1P8Q9HAU6 139 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SLC6A13Q9NSD5 602 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ARL8BQ9NVJ2 186 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 DDX18Q9NVP1 670 aaKnown RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 VAPAQ9P0L0 249 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 SLAMF8Q9P0V8 285 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ABCD2Q9UBJ2 740 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ERVK-19Q9WJR5 959 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 RAXQ9Y2V3 346 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 ZNF451Q9Y4E5 1061 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 PCDHGB7Q9Y5F8 929 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 PCDHGA9Q9Y5G4 932 aaKnown RBP10.46□□□□□ -0.73
MSH5-214ENST00000468602 KCNMB2Q9Y691 235 aa10.46□□□□□ -0.73
MSH5-214ENST00000468602 IGHV3-20A0A0C4DH32 117 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 LOC100653049A0A140TA62 436 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 CDC14CA4D256 554 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 FRG2CA6NGY1 282 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 HRKO00198 91 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 MRASO14807 208 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 KRT34O76011 436 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 SEC24DO94855 1032 aaPredicted RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 AK1P00568 194 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 HMGN2P05204 90 aaKnown RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 CT45A8P0DMV1 189 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 CT45A9P0DMV2 189 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 SLC6A2P23975 617 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 SSTR4P31391 388 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 TRHRP34981 398 aaPredicted RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 GPC1P35052 558 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 CPOXP36551 454 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 ANXA11P50995 505 aaKnown RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 EEF1A2Q05639 463 aaKnown RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 SRSF6Q13247 344 aaKnown RBP10.45□□□□□ -0.74
MSH5-214ENST00000468602 FXNQ16595 210 aa10.45□□□□□ -0.74
MSH5-214ENST00000468602 CYP27C1Q4G0S4 372 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms