RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 Q96MF0 132 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 ITPAQ9BY32 194 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 SERHLQ9NQF3 203 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 C6orf203Q9P0P8 240 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 MAPRE3Q9UPY8 281 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 EXO1Q9UQ84 846 aaKnown RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 RNF11Q9Y3C5 154 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CCDC188H7C350 402 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 EIF3HO15372 352 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPN7-207ENST00000468385 SMPD2O60906 423 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 UGT2B11O75310 529 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CBR3O75828 277 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 TNFSF13O75888 250 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 SEMA3DO95025 777 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CPMP14384 443 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PCSK6P29122 969 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CRABP2P29373 138 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CPOXP36551 454 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PIK3CGP48736 1102 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 STARP49675 285 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 LHX2P50458 406 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
PTPN7-207ENST00000468385 IRF9Q00978 393 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 SNTA1Q13424 505 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 GAB1Q13480 694 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PFKFB4Q16877 469 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 KBTBD12Q3ZCT8 623 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 FAM111BQ6SJ93 734 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 ENPP6Q6UWR7 440 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PRSS57Q6UWY2 283 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 GOLGA7Q7Z5G4 137 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CENPLQ8N0S6 344 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-207ENST00000468385 SIMC1Q8NDZ2 872 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 OR14L1PQ8NHC6 308 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 RHEBL1Q8TAI7 183 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 RDH11Q8TC12 318 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 KCTD4Q8WVF5 259 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PIGTQ969N2 578 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 OMA1Q96E52 524 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 ACBD3Q9H3P7 528 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 EHD3Q9NZN3 535 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 KLRF1Q9NZS2 232 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 NDRG3Q9UGV2 375 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 ZNF639Q9UID6 485 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 CES1P1Q9UKY3 287 aa11.87□□□□□ -0.51
PTPN7-207ENST00000468385 A0A1W2PNV4 684 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 PLOD2O00469 737 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
PTPN7-207ENST00000468385 TGM6O95932 706 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 KLK1P06870 262 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 GFAPP14136 432 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 PORP16435 677 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CHMP24386 653 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CNTFP26441 200 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 ALDH18A1P54886 795 aaKnown RBP11.86□□□□□ -0.51
PTPN7-207ENST00000468385 DIO3P55073 304 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CLDN18P56856 261 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 FAM27E3Q08E93 113 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 PLCXD2Q0VAA5 305 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 MAP4K2Q12851 820 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 GTF2H2Q13888 395 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 GTF2H2CQ6P1K8 395 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 YTHDF3Q7Z739 585 aaKnown RBP11.86□□□□□ -0.51
PTPN7-207ENST00000468385 IFNEQ86WN2 208 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 LCORQ96JN0 433 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-207ENST00000468385 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 SERPINI1Q99574 410 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 BRINP2Q9C0B6 783 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 IPPKQ9H8X2 491 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 MAT2BQ9NZL9 334 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 CFL2Q9Y281 166 aa11.86□□□□□ -0.51
PTPN7-207ENST00000468385 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 PRAMEF25A6NGN4 478 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 OR7A17O14581 309 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 MSTNO14793 375 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 SMAD7O15105 426 aaKnown RBP11.85□□□□□ -0.51
PTPN7-207ENST00000468385 ACOX3O15254 700 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 HCRTR2O43614 444 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 SIX3O95343 332 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-207ENST00000468385 CBX7O95931 251 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 GSTA2P09210 222 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 ZNF708P17019 499 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 SRD5A2P31213 254 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 MC3RP41968 323 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 PCYT1AP49585 367 aa11.85□□□□□ -0.51
PTPN7-207ENST00000468385 EEF1A1P68104 462 aaKnown RBP11.85□□□□□ -0.51
PTPN7-207ENST00000468385 HMGCS1Q01581 520 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms