RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FEN1P39748 380 aaKnown RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ID2Q02363 134 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 TMEM179BQ7Z7N9 219 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ANKRD13BQ86YJ7 626 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ZC3H7AQ8IWR0 971 aaKnown RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 HS3ST5Q8IZT8 346 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 PIK3C3Q8NEB9 887 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ABTB1Q969K4 478 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 MTERF3Q96E29 417 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 MMABQ96EY8 250 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 PLEKHA8Q96JA3 519 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ROGDIQ9GZN7 287 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 IL1RAPQ9NPH3 570 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CUTCQ9NTM9 273 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ATAD3AQ9NVI7 634 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 LYARQ9NX58 379 aaKnown RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ENPP5Q9UJA9 477 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 BAG5Q9UL15 447 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 A0A1W2PRB8 838 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 RNASET2O00584 256 aaKnown RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CYR61O00622 381 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF749O43361 778 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CHST10O43529 356 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 HTR1AP08908 422 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 DRD2P14416 443 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF182P17025 639 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 GPX2P18283 190 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 OR1D4P47884 311 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CASP9P55211 416 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 GAB1Q13480 694 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 GRM7Q14831 915 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 OR2T5Q6IEZ7 315 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 SLC48A1Q6P1K1 146 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 TTC29Q8NA56 475 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 BPIFB6Q8NFQ5 453 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 OR4A15Q8NGL6 344 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 OR2T29Q8NH02 315 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 TANKQ92844 425 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 FKBP10Q96AY3 582 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CNRIP1Q96F85 164 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CTRCQ99895 268 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 FAIM2Q9BWQ8 316 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CLCA2Q9UQC9 943 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 WBP11Q9Y2W2 641 aaKnown RBP17.47■□□□□ 0.39
CAPN3-209ENST00000466222 TPRKBQ9Y3C4 175 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF292O60281 2723 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 C1orf226A1L170 272 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 TMX2-CTNND1H3BSU7 103 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 DPM1O60762 260 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 CDC123O75794 336 aaPredicted RBP17.46■□□□□ 0.39
CAPN3-209ENST00000466222 GP1BAP07359 652 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 NR2F6P10588 404 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 FPR1P21462 350 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF10P21506 573 aaPredicted RBP17.46■□□□□ 0.39
CAPN3-209ENST00000466222 ITGA1P56199 1179 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 PCBP4P57723 403 aaKnown RBP17.46■□□□□ 0.39
CAPN3-209ENST00000466222 TNFRSF17Q02223 184 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 ZFP36L1Q07352 338 aaKnown RBP17.46■□□□□ 0.39
CAPN3-209ENST00000466222 CDK5R2Q13319 367 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 VMACQ2NL98 169 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 C1orf189Q5VU69 101 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 LAIR2Q6ISS4 152 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 SLC38A9Q8NBW4 561 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 OR5AK3PQ8NH89 298 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 SLC35C2Q9NQQ7 365 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 NDOR1Q9UHB4 597 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 SERTAD3Q9UJW9 196 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
CAPN3-209ENST00000466222 UNC13CQ8NB66 2214 aa17.46■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF99A8MXY4 864 aaPredicted RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 PDPK1O15530 556 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 LDB3O75112 727 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 JRKO75564 520 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 SEMG1P04279 462 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 PCMT1P22061 227 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 DNAJA1P31689 397 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 RPL3P39023 403 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 HSPB3Q12988 150 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 FAM53BQ14153 422 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 NDUFA9Q16795 377 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CCDC116Q8IYX3 515 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GPR135Q8IZ08 494 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GIPC3Q8TF64 312 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 PEX11GQ96HA9 241 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 COX4I2Q96KJ9 171 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 FUNDC2Q9BWH2 189 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 ASPSCR1Q9BZE9 553 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 RHBDL2Q9NX52 303 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 TOR4AQ9NXH8 423 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 SIDT1Q9NXL6 827 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 WARS2Q9UGM6 360 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 BTNL2Q9UIR0 455 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CORO2BQ9UQ03 480 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 MDC1Q14676 2089 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CLIC1O00299 241 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GUCY1B2O75343 617 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 NSA2O95478 260 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms