RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TMCO6Q96DC7 493 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TRMT61AQ96FX7 289 aaKnown RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 SDHCQ99643 169 aaPredicted RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 GPA33Q99795 319 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TIMM29Q9BSF4 260 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TRMT61BQ9BVS5 477 aaKnown RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 QRSL1Q9H0R6 528 aaKnown RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 GIMAP4Q9NUV9 329 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 ASB4Q9Y574 426 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
SYNE4-204ENST00000465425 MYO10Q9HD67 2058 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 CYP7B1O75881 506 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 HOXB3P14651 431 aaPredicted RBP17.24■□□□□ 0.35
SYNE4-204ENST00000465425 MPIP34949 423 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 GJA4P35212 333 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 KCNJ8Q15842 424 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ZIC1Q15915 447 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 UAP1L1Q3KQV9 507 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF311Q5JNZ3 666 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ATAT1Q5SQI0 421 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 OR2L5Q8NG80 312 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 NELL2Q99435 816 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 EQTNQ9NQ60 294 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 SERGEFQ9UGK8 458 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 TRAPPC4Q9Y296 219 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 STON1Q9Y6Q2 735 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 COL4A3Q01955 1670 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 CKAP5Q14008 2032 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 C4orf51C9J302 202 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 AIFM1O95831 613 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 TSPAN19P0C672 248 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 NR2F6P10588 404 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 CSNK2A2P19784 350 aaPredicted RBP17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
SYNE4-204ENST00000465425 MXD1Q05195 221 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 SGCGQ13326 291 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 RUNX3Q13761 415 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 AGERQ15109 404 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 SLC27A4Q6P1M0 643 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 RRM2BQ7LG56 351 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 TMEM145Q8NBT3 493 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 SRFBP1Q8NEF9 429 aaKnown RBP17.24■□□□□ 0.35
SYNE4-204ENST00000465425 C16orf58Q96GQ5 468 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 RERGLQ9H628 205 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 EGLN3Q9H6Z9 239 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 SLC6A20Q9NP91 592 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 PRDM7Q9NQW5 492 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 GPSM3Q9Y4H4 160 aa17.24■□□□□ 0.35
SYNE4-204ENST00000465425 ADH1BP00325 375 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 CERS1P27544 350 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 IFNA8P32881 189 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 AHRP35869 848 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 ETV5P41161 510 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 ETV1P50549 477 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 ABATP80404 500 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 HYAL2Q12891 473 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 C18orf63Q68DL7 685 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 PSRC1Q6PGN9 363 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 VITQ6UXI7 678 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 LAX1Q8IWV1 398 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 GJD3Q8N144 294 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 SLC9A6Q92581 669 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 EFHD2Q96C19 240 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 PLA2G12AQ9BZM1 189 aa17.23■□□□□ 0.35
SYNE4-204ENST00000465425 TESQ9UGI8 421 aaKnown RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 SPIN1Q9Y657 262 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 GOLGA4Q13439 2230 aaKnown RBP17.23■□□□□ 0.35
SYNE4-204ENST00000465425 A0A087WUU8 490 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 IRGMA1A4Y4 181 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 EMC8O43402 210 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 DYRK3O43781 588 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 CDRT1O95170 752 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 MAN2A2P49641 1150 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 WNT4P56705 351 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 RAB8AP61006 207 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PRAMEF8Q5VWM4 474 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PRAMEF7Q5VXH5 474 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 MRM1Q6IN84 353 aaKnown RBP17.22■□□□□ 0.35
SYNE4-204ENST00000465425 SLC48A1Q6P1K1 146 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 SLC36A4Q6YBV0 504 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 C11orf74Q86VG3 221 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 LAPTM4BQ86VI4 370 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 FBXL6Q8N531 539 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 SCAIQ8N9R8 606 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 OR2L3Q8NG85 312 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TMEM163Q8TC26 289 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PHOSPHO2Q8TCD6 241 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TMEM203Q969S6 136 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 SLC38A2Q96QD8 506 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PRRG3Q9BZD7 231 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 RSPH9Q9H1X1 276 aaPredicted RBP17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TXNL4BQ9NX01 149 aaKnown RBP17.22■□□□□ 0.35
SYNE4-204ENST00000465425 ZFR2Q9UPR6 939 aaKnown RBP17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PLEKHM1Q9Y4G2 1056 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 KCNE3Q9Y6H6 103 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 FAM170BA6NMN3 283 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PRODHO43272 600 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 ALPPP05187 535 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms