RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 OR2L13Q8N349 312 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 SPACA9Q96E40 222 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 MAGED4Q96JG8 741 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 OR52B2Q96RD2 323 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 DUSP26Q9BV47 211 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 ITPAQ9BY32 194 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 TRIM4Q9C037 500 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 BHLHE41Q9C0J9 482 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 NXF5Q9H1B4 397 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 AGPAT4Q9NRZ5 378 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 DDX18Q9NVP1 670 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 ASF1BQ9NVP2 202 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 AIG1Q9NVV5 245 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 NTNG1Q9Y2I2 539 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 TCP11X1B4DZS4 312 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 ANKRD28O15084 1053 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 ACOX3O15254 700 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 EFNA1P20827 205 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 RPS6KA2Q15349 733 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM180AQ6UWF9 173 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 ACAD11Q709F0 780 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 CAMKMTQ7Z624 323 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 PSD4Q8NDX1 1056 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 GRHL3Q8TE85 626 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 OR5P2Q8WZ92 322 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 MIB2Q96AX9 1013 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 BARD1Q99728 777 aaKnown RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 GPR55Q9Y2T6 319 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 KLF13Q9Y2Y9 288 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 GPR45Q9Y5Y3 372 aa13.39□□□□□ -0.27
SQSTM1-205ENST00000464493 NBASA2RRP1 2371 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 FRG2CA6NGY1 282 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 KLRC4-KLRK1H3BQV0 150 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 ERN1O75460 977 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 PSMG1O95456 288 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CT45A8P0DMV1 189 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CT45A9P0DMV2 189 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 ABCD3P28288 659 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 IDH3AP50213 366 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CDK9P50750 372 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 AQP5P55064 265 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 NME5P56597 212 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 UFM1P61960 85 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 FOXK1P85037 733 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 NNATQ16517 81 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 NTRK2Q16620 822 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 CT45A2Q5DJT8 189 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 TMEM64Q6YI46 380 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 BCORP1Q8N888 145 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM98AQ8NCA5 519 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 OR8J2Q8NGG1 315 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 DNAJB8Q8NHS0 232 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 FAR1Q8WVX9 515 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 TESCQ96BS2 214 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 BTBD9Q96Q07 612 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 RP1L1Q8IWN7 2480 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 NUP214P35658 2090 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1-205ENST00000464493 SHANK1Q9Y566 2161 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 J3QKU1 62 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 TO15178 435 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 UBDO15205 165 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 EMC8O43402 210 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PEX1O43933 1283 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 P04436 131 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 IDO1P14902 403 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 NAGAP17050 411 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 KIR3DL1P43629 444 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 TMED10P49755 219 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PRKAG1P54619 331 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 CORO7P57737 925 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PMP22Q01453 160 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 ZNF155Q12901 538 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 GSTA3Q16772 222 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 SLC22A10Q63ZE4 541 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 OR4F3Q6IEY1 312 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PRR22Q8IZ63 422 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM13CQ8NE31 585 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms