RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PRDX2P32119 198 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 CAMLGP49069 296 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 HERVK_113P63132 956 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ERVK-8P63133 956 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 NOP14P78316 857 aaKnown RBP3.28□□□□□ -1.88
CLK1-208ENST00000464454 DPYSQ14117 519 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 CCL14Q16627 93 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 PARP6Q2NL67 630 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 VWA2Q5GFL6 755 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 SEL1L3Q68CR1 1132 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ISLR2Q6UXK2 745 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 APOOLQ6UXV4 268 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 UNC5DQ6UXZ4 953 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 MINDY2Q8NBR6 621 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 WDR36Q8NI36 951 aaKnown RBP3.28□□□□□ -1.88
CLK1-208ENST00000464454 TAF4BQ92750 862 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
CLK1-208ENST00000464454 RPP25Q9BUL9 199 aaKnown RBP3.28□□□□□ -1.88
CLK1-208ENST00000464454 ST6GALNAC5Q9BVH7 336 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ERVK-6Q9BXR3 956 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ADNPQ9H2P0 1102 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ALG9Q9H6U8 611 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 GNB4Q9HAV0 340 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 ABCC13Q9NSE7 274 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 STARD5Q9NSY2 213 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 TAS2R3Q9NYW6 316 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 FKBP7Q9Y680 259 aa3.28□□□□□ -1.88
CLK1-208ENST00000464454 A0A0J9YVX5 310 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 A0A1B0GTH9 108 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 SHISA9B4DS77 424 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 E9PMD0 336 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 SGK494L7N484 410 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 LGALS8O00214 317 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 GALR3O60755 368 aaPredicted RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 NUDT14O95848 222 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 GOT2P00505 430 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 PTMAP06454 111 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 HOXD4P09016 255 aaPredicted RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 CAPN2P17655 700 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 FUT1P19526 365 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 UCP1P25874 307 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 PTPN4P29074 926 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 SAA4P35542 130 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 CD86P42081 329 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 VCPP55072 806 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 RAG2P55895 527 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 BNIP1Q12981 228 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 CEBPEQ15744 281 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ZNF239Q16600 458 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 PCK2Q16822 640 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ZNF699Q32M78 642 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 LRIT3Q3SXY7 679 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ZNF506Q5JVG8 444 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 LDLRAP1Q5SW96 308 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 C12orf60Q5U649 245 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ZCCHC12Q6PEW1 402 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ATRAIDQ6UW56 229 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 STOX1Q6ZVD7 989 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 TIPARPQ7Z3E1 657 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 SYVN1Q86TM6 617 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 SLC25A42Q86VD7 318 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 CENPSQ8N2Z9 138 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 SPEM1Q8N4L4 309 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 DLX4Q92988 240 aaPredicted RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 TOMM40LQ969M1 308 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 BIRC7Q96CA5 298 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 NTNG2Q96CW9 530 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 WRAP53Q9BUR4 548 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 APOOQ9BUR5 198 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 PNNQ9H307 717 aaKnown RBP3.27□□□□□ -1.89
CLK1-208ENST00000464454 HPF1Q9NWY4 346 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 FZR1Q9UM11 496 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 NCAPD2Q15021 1401 aa3.27□□□□□ -1.89
CLK1-208ENST00000464454 ABCC4O15439 1325 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 NPIPA2E9PIF3 369 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 MCF2LO15068 1137 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 RANBP6O60518 1105 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 PDE5AO76074 875 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 SNRPCP09234 159 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 SLC35G4P0C7Q5 338 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 CYP11B1P15538 503 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 IL4RP24394 825 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 PTPN6P29350 595 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 GPC3P51654 580 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 TRA2BP62995 288 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 HTD2P86397 168 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 NAAAQ02083 359 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 SRYQ05066 204 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 FUT7Q11130 342 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 CD226Q15762 336 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 ZKSCAN8Q15776 578 aaPredicted RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 CNPY1Q3B7I2 92 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 KRT71Q3SY84 523 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 LINC00242Q5T6M2 205 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 RFWD3Q6PCD5 774 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 PAQR9Q6ZVX9 377 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms