RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SULT1C3Q6IMI6 304 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 RPUSD3Q6P087 351 aaKnown RBP4.96□□□□□ -1.62
CD46-211ENST00000464082 PAPD4Q6PIY7 484 aaKnown RBP4.96□□□□□ -1.62
CD46-211ENST00000464082 TMIGD1Q6UXZ0 262 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 FRA10AC1Q70Z53 315 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ABHD13Q7L211 337 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 LRRC70Q7Z2Q7 622 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 GPSM1Q86YR5 675 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 CRLF3Q8IUI8 442 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 LAS2Q8IYD9 372 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 TCAIMQ8N3R3 496 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 APCDD1LQ8NCL9 501 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ST6GALNAC3Q8NDV1 305 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 MDS2Q8NDY4 140 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 TRPV3Q8NET8 790 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 OR2L5Q8NG80 312 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 DNAJB14Q8TBM8 379 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 M1APQ8TC57 530 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 GRHL3Q8TE85 626 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ZNF473Q8WTR7 871 aaKnown RBP4.96□□□□□ -1.62
CD46-211ENST00000464082 DCAKDQ8WVC6 231 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 FAR1Q8WVX9 515 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 EXT2Q93063 718 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 SIGLEC12Q96PQ1 595 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 MS4A8Q9BY19 250 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 HES7Q9BYE0 225 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 TXLNGYQ9BZA5 131 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ILKAPQ9H0C8 392 aaPredicted RBP4.96□□□□□ -1.62
CD46-211ENST00000464082 EPS8L2Q9H6S3 715 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ZBTB26Q9HCK0 441 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 SNX15Q9NRS6 342 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 WWOXQ9NZC7 414 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 NUDT4Q9NZJ9 180 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 G3BP2Q9UN86 482 aaKnown RBP4.96□□□□□ -1.62
CD46-211ENST00000464082 NOX1Q9Y5S8 564 aa4.96□□□□□ -1.62
CD46-211ENST00000464082 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 FBN2P35556 2912 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 APCP25054 2843 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CSMD1Q96PZ7 3565 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 A0A096LPK6 155 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 OR5H15A6NDH6 313 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 SAGE2PA6NJ88 616 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 K7EPI3 171 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 RTCAO00442 366 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 ERI3O43414 337 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 B4GALT2O60909 372 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 VPS4BO75351 444 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 ITGA10O75578 1167 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 SCELO95171 688 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 KLHL2O95198 593 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 SIX3O95343 332 aaPredicted RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 ETHE1O95571 254 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 ACSL3O95573 720 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CLDN1O95832 211 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 MYBL2P10244 700 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 RNH1P13489 461 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 CXCR2P25025 360 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 GSTM2P28161 218 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CRABP2P29373 138 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 SLC12A2P55011 1212 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 LIM2P55344 173 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 RAB38P57729 211 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 BTN3A2P78410 334 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 PMP22Q01453 160 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CHIT1Q13231 466 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 RBBP5Q15291 538 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 NSDHLQ15738 373 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 EXT1Q16394 746 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 PDK4Q16654 411 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 BTBD16Q32M84 506 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 FAM153CQ494X1 144 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 ACER2Q5QJU3 275 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 MFSD4BQ5TF39 518 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 C11orf87Q6NUJ2 197 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CHERPQ8IWX8 916 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 BEST3Q8N1M1 668 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 ZNF321PQ8N8H1 164 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 OR7G3Q8NG95 312 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 ZFP28Q8NHY6 868 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 RHEBL1Q8TAI7 183 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 STAG3L4Q8TBR4 150 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 TM9SF4Q92544 642 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 NR4A3Q92570 626 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 PTCD3Q96EY7 689 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 VPS50Q96JG6 964 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CNDP1Q96KN2 507 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 F2RL3Q96RI0 385 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 PAFAH2Q99487 392 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 FMO2Q99518 471 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 SORBS1Q9BX66 1292 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 NPLQ9BXD5 320 aaPredicted RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 REXO4Q9GZR2 422 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 TRIM45Q9H8W5 580 aaPredicted RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 CLK4Q9HAZ1 481 aaKnown RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 NMRAL1Q9HBL8 299 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 CD274Q9NZQ7 290 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 H2AFY2Q9P0M6 372 aaPredicted RBP4.95□□□□□ -1.62
CD46-211ENST00000464082 DAPP1Q9UN19 280 aa4.95□□□□□ -1.62
CD46-211ENST00000464082 VPS4AQ9UN37 437 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms