RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 PLD6Q8N2A8 252 aaKnown RBP11.24□□□□□ -0.61
RPA3-206ENST00000463632 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 OR4F6Q8NGB9 312 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 INTS12Q96CB8 462 aaKnown RBP11.24□□□□□ -0.61
RPA3-206ENST00000463632 LCORQ96JN0 433 aaPredicted RBP11.24□□□□□ -0.61
RPA3-206ENST00000463632 ALPK1Q96QP1 1244 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 NODALQ96S42 347 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 HBEGFQ99075 208 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 CALHM2Q9HA72 323 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 FARSBQ9NSD9 589 aaKnown RBP11.24□□□□□ -0.61
RPA3-206ENST00000463632 NMRK1Q9NWW6 199 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 XPR1Q9UBH6 696 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 PRODH2Q9UF12 536 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 ADAM29Q9UKF5 820 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 TMCO1Q9UM00 188 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 SNX6Q9UNH7 406 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 DTX4Q9Y2E6 619 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 PLLPQ9Y342 182 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 PCDHA9Q9Y5H5 950 aa11.24□□□□□ -0.61
RPA3-206ENST00000463632 HMX2A2RU54 273 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 MBD3L4A6NDZ8 208 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 MBD3L3A6NE82 208 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 MBD3L5A6NJ08 208 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 POC1B-GALNT4F8VUJ3 575 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 SNPHO15079 494 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 CBR3O75828 277 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 SMNDC1O75940 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPA3-206ENST00000463632 OTCP00480 354 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 ALDOAP04075 364 aaKnown RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 PCSK2P16519 638 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 NAGAP17050 411 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 ADSLP30566 484 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 CPOXP36551 454 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 STARP49675 285 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 CDH13P55290 713 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 LTB4RQ15722 352 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 FNDC7Q5VTL7 733 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 SLC48A1Q6P1K1 146 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 METTL2BQ6P1Q9 378 aaKnown RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 PLXDC2Q6UX71 529 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 IFNEQ86WN2 208 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 GRAMD2AQ8IUY3 354 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 METTL4Q8N3J2 472 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 MBD3L2Q8NHZ7 208 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 UHMK1Q8TAS1 419 aaKnown RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 SLC44A1Q8WWI5 657 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 TMCO6Q96DC7 493 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 DTNBP1Q96EV8 351 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 SFXN2Q96NB2 322 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 GPR78Q96P69 363 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 TM9SF2Q99805 663 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 TUBA1CQ9BQE3 449 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 UBQLN3Q9H347 655 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 TAS2R10Q9NYW0 307 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 SENP1Q9P0U3 644 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 PCTPQ9UKL6 214 aa11.23□□□□□ -0.61
RPA3-206ENST00000463632 EIF3LQ9Y262 564 aaKnown RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 RPH3AQ9Y2J0 694 aaPredicted RBP11.23□□□□□ -0.61
RPA3-206ENST00000463632 CELSR1Q9NYQ6 3014 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 STX16O14662 325 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 ACOX3O15254 700 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 DNAJC13O75165 2243 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 UGT2B11O75310 529 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 PDYNP01213 254 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 IL12BP29460 328 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 MTORP42345 2549 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 PRRC2AP48634 2157 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 DIO3P55073 304 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 DCAF7P61962 342 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 ADAM8P78325 824 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 MRPS35P82673 323 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 CKAP4Q07065 602 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 MAP4K2Q12851 820 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 FOXF2Q12947 444 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 TRAF3Q13114 568 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 TSNAXIP1Q2TAA8 658 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 PRICKLE4Q2TBC4 344 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 TRMT12Q53H54 448 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 NHSL2Q5HYW2 709 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 C10orf62Q5T681 223 aaPredicted RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 OR5M10Q6IEU7 315 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 AAGABQ6PD74 315 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 Q71RC1 249 aaPredicted RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 C1orf52Q8N6N3 182 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 CDC26Q8NHZ8 85 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 ZPLD1Q8TCW7 415 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 TRPC4APQ8TEL6 797 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms