RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZNF628Q5EBL2 1059 aa12□□□□□ -0.49
VAPB-203ENST00000463370 COLEC12Q5KU26 742 aa12□□□□□ -0.49
VAPB-203ENST00000463370 GPR107Q5VW38 600 aa12□□□□□ -0.49
VAPB-203ENST00000463370 NKAIN2Q5VXU1 208 aa12□□□□□ -0.49
VAPB-203ENST00000463370 TMEM236Q5W0B7 351 aa12□□□□□ -0.49
VAPB-203ENST00000463370 KRT73Q86Y46 540 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
VAPB-203ENST00000463370 GALNT15Q8N3T1 639 aa12□□□□□ -0.49
VAPB-203ENST00000463370 SPEM1Q8N4L4 309 aa12□□□□□ -0.49
VAPB-203ENST00000463370 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
VAPB-203ENST00000463370 SLC9A6Q92581 669 aa12□□□□□ -0.49
VAPB-203ENST00000463370 CDS1Q92903 461 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ZNF566Q969W8 418 aa12□□□□□ -0.49
VAPB-203ENST00000463370 APOL4Q9BPW4 351 aa12□□□□□ -0.49
VAPB-203ENST00000463370 LHPPQ9H008 270 aa12□□□□□ -0.49
VAPB-203ENST00000463370 NTMQ9P121 344 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ERVK-18Q9QC07 812 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ABCA7Q8IZY2 2146 aa12□□□□□ -0.49
VAPB-203ENST00000463370 AQP9O43315 295 aa12□□□□□ -0.49
VAPB-203ENST00000463370 AHCYL1O43865 530 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MAN1A2O60476 641 aa12□□□□□ -0.49
VAPB-203ENST00000463370 NTN1O95631 604 aa12□□□□□ -0.49
VAPB-203ENST00000463370 LGI1O95970 557 aa12□□□□□ -0.49
VAPB-203ENST00000463370 PROS1P07225 676 aa12□□□□□ -0.49
VAPB-203ENST00000463370 IGFBP1P08833 259 aaPredicted RBP12□□□□□ -0.49
VAPB-203ENST00000463370 CT62P0C5K7 136 aa12□□□□□ -0.49
VAPB-203ENST00000463370 CCDC159P0C7I6 412 aa12□□□□□ -0.49
VAPB-203ENST00000463370 PORP16435 677 aaPredicted RBP12□□□□□ -0.49
VAPB-203ENST00000463370 ZNF10P21506 573 aaPredicted RBP12□□□□□ -0.49
VAPB-203ENST00000463370 NXPH1P58417 271 aa12□□□□□ -0.49
VAPB-203ENST00000463370 GABARAPL2P60520 117 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MLIPQ5VWP3 458 aa12□□□□□ -0.49
VAPB-203ENST00000463370 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
VAPB-203ENST00000463370 KLHL17Q6TDP4 642 aa12□□□□□ -0.49
VAPB-203ENST00000463370 DGAT2L6Q6ZPD8 337 aa12□□□□□ -0.49
VAPB-203ENST00000463370 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
VAPB-203ENST00000463370 GKN2Q86XP6 184 aa12□□□□□ -0.49
VAPB-203ENST00000463370 CCDC103Q8IW40 242 aa12□□□□□ -0.49
VAPB-203ENST00000463370 TAGAPQ8N103 731 aa12□□□□□ -0.49
VAPB-203ENST00000463370 OR13F1Q8NGS4 319 aa12□□□□□ -0.49
VAPB-203ENST00000463370 SLC7A13Q8TCU3 470 aa12□□□□□ -0.49
VAPB-203ENST00000463370 SHDQ96IW2 340 aa12□□□□□ -0.49
VAPB-203ENST00000463370 DHRS1Q96LJ7 313 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MS4A4EQ96PG1 132 aa12□□□□□ -0.49
VAPB-203ENST00000463370 CCDC90BQ9GZT6 254 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MS4A12Q9NXJ0 267 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ACAD8Q9UKU7 415 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MKLN1Q9UL63 735 aa12□□□□□ -0.49
VAPB-203ENST00000463370 POFUT2Q9Y2G5 429 aa12□□□□□ -0.49
VAPB-203ENST00000463370 A0A0A6YYC8 382 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 A0A0G2JPF8 293 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 CLDN24A6NM45 220 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 HNRNPCL2B2RXH8 293 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 HNRNPCL3B7ZW38 293 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 I3L1I5 382 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 K7ESF4 209 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 HNRNPCL4P0DMR1 293 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 PCMT1P22061 227 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 GGT2P36268 569 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 DUSP5Q16690 384 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 FHL5Q5TD97 284 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 IQCHQ86VS3 1027 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 ZNF655Q8N720 491 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 RASSF5Q8WWW0 418 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 NODALQ96S42 347 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 SLC38A3Q99624 504 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 FUZQ9BT04 418 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 MAN2C1Q9NTJ4 1040 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 GIN1Q9NXP7 522 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 HSPE1-MOB4S4R3N1 261 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 SDK1Q7Z5N4 2213 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 DSPPQ9NZW4 1301 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 H1F0P07305 194 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 ACP2P11117 423 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 IDH2P48735 452 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 SLC35A2P78381 396 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 MAT1AQ00266 395 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 HOXC5Q00444 222 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 TOP3AQ13472 1001 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 MANEAQ5SRI9 462 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 CCNJQ5T5M9 372 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 C16orf62Q7Z3J2 963 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 C17orf82Q86X59 251 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 GJD3Q8N144 294 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 DNAJC22Q8N4W6 341 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 ADAMTS15Q8TE58 950 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 CLDN23Q96B33 292 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 ANKRD9Q96BM1 317 aaPredicted RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 C12orf43Q96C57 262 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 TGM7Q96PF1 710 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 TRNT1Q96Q11 434 aaKnown RBP11.99□□□□□ -0.49
VAPB-203ENST00000463370 PSD2Q9BQI7 771 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 BTBD2Q9BX70 525 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 DGCR6LQ9BY27 220 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms