RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 AHSPQ9NZD4 102 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 EHD3Q9NZN3 535 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 BCAP29Q9UHQ4 241 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 SLC12A4Q9UP95 1085 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 C1orf226A1L170 272 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 TUBAL3A6NHL2 446 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 PPP6CO00743 305 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 ERAL1O75616 437 aaKnown RBP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 CBX7O95931 251 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 ATP1B1P05026 303 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 RPS17P08708 135 aaKnown RBP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 RBP1P09455 135 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 FREM3P0C091 2139 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 NAGAP17050 411 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 CTSSP25774 331 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 CNTFP26441 200 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 PHBP35232 272 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 DEKP35659 375 aaKnown RBP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 DGKQP52824 942 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 PLCXD2Q0VAA5 305 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 MAP4K2Q12851 820 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 SF3B4Q15427 424 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 LTB4RQ15722 352 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 C10orf62Q5T681 223 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 FAM180BQ6P0A1 224 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 LETMD1Q6P1Q0 360 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 TMEM81Q6P7N7 255 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 SYT10Q6XYQ8 523 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 ADCY4Q8NFM4 1077 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 ALPK1Q96QP1 1244 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 SERHLQ9NQF3 203 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 ZNF639Q9UID6 485 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 MAPRE3Q9UPY8 281 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 PLLPQ9Y342 182 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 FLNAP21333 2647 aaKnown RBP14.67□□□□□ -0.06
COL7A1-204ENST00000462475 EXPH5Q8NEV8 1989 aa14.67□□□□□ -0.06
COL7A1-204ENST00000462475 GOLGA6L10A6NI86 522 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 ICOSLGO75144 302 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 SMIM24O75264 130 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 CDH16O75309 829 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 UGT2B11O75310 529 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 PDYNP01213 254 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 EPXP11678 715 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 HOXB4P17483 251 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-204ENST00000462475 TSPAN8P19075 237 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 ETF1P62495 437 aaKnown RBP14.66□□□□□ -0.06
COL7A1-204ENST00000462475 FOXF2Q12947 444 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 RCAN2Q14206 197 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 SLC30A6Q6NXT4 461 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 C8orf74Q6P047 294 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 PLXDC2Q6UX71 529 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 MILR1Q7Z6M3 343 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 KIF18BQ86Y91 864 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 OR52R1Q8NGF1 315 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 TRPC4APQ8TEL6 797 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 SLC44A1Q8WWI5 657 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 TM4SF18Q96CE8 201 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 CTHRC1Q96CG8 243 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 KLHL29Q96CT2 875 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 LCORQ96JN0 433 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-204ENST00000462475 HBEGFQ99075 208 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 TUBA1CQ9BQE3 449 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 LRRC1Q9BTT6 524 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 CALHM2Q9HA72 323 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 DLL4Q9NR61 685 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 KLRF1Q9NZS2 232 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 JKAMPQ9P055 326 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 FETUBQ9UGM5 382 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 TMCO1Q9UM00 188 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 CFL2Q9Y281 166 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 MED12Q93074 2177 aa14.66□□□□□ -0.06
COL7A1-204ENST00000462475 PRAMEF25A6NGN4 478 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ACOX3O15254 700 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 GUCY1B2O75343 617 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ATE1O95260 518 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 IL18BPO95998 194 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ACTL6AO96019 429 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 INHBAP08476 426 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 RHOXF2BP0C7M4 288 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 TMIGD3P0DMS9 266 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 CYP4B1P13584 511 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 PCSK2P16519 638 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 CSNK2A2P19784 350 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 OPRM1P35372 400 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 CDH13P55290 713 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 MRPS35P82673 323 aaKnown RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 SORDQ00796 357 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 TRMT12Q53H54 448 aaKnown RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 FBXW10Q5XX13 1052 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 NUP54Q7Z3B4 507 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 WDSUB1Q8N9V3 476 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 RDH11Q8TC12 318 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ZPLD1Q8TCW7 415 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ZNF483Q8TF39 744 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 SELENOMQ8WWX9 145 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 MBD6Q96DN6 1003 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 CNRIP1Q96F85 164 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 PAFAH2Q99487 392 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 FUT8Q9BYC5 575 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms