RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ABCA12Q86UK0 2595 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 LRBAP50851 2863 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRGV5A0A0B4J1U4 118 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ANKRD33BA6NCL7 494 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 C19orf84I3L1E1 186 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ACOX3O15254 700 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SUSD5O60279 629 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 HCN1O60741 890 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRIM3O75382 744 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SLU7O95391 586 aaKnown RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 RFPL3SP0C7P2 107 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 UROSP10746 265 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 COX6B1P14854 86 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 DDCP20711 480 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ACVR2AP27037 513 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 EMDP50402 254 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SLC10A1Q14973 349 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 CEBPEQ15744 281 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRMT12Q53H54 448 aaKnown RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM198Q66K66 360 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 CLEC6AQ6EIG7 209 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM211Q6ICI0 200 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ZNF585AQ6P3V2 769 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 EMBQ6PCB8 327 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRIM46Q7Z4K8 759 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRABD2AQ86V40 505 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TICAM1Q8IUC6 712 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SRRM1Q8IYB3 904 aaKnown RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 CCDC116Q8IYX3 515 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 LIX1Q8N485 282 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 CA5BP1Q8WTZ4 195 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SARAFQ96BY9 339 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 ERP27Q96DN0 273 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 OMA1Q96E52 524 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 HSPBAP1Q96EW2 488 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 LCORQ96JN0 433 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 TRMOQ9BU70 441 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SLC6A15Q9H2J7 730 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 METTL7AQ9H8H3 244 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 MYNNQ9NPC7 610 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 MIEF1Q9NQG6 463 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 RRAGDQ9NQL2 400 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SLC35C2Q9NQQ7 365 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 QPCTLQ9NXS2 382 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 SPRR3Q9UBC9 169 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 LGALS13Q9UHV8 139 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 C15orf41Q9Y2V0 281 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 FIS1Q9Y3D6 152 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 PTGDR2Q9Y5Y4 395 aa9.33□□□□□ -0.92
SF3A3-204ENST00000462258 V9GYY5 206 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-204ENST00000462258 MYO9AB2RTY4 2548 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ADGRG4Q8IZF6 3080 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FRG2CA6NGY1 282 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 AZIN1O14977 448 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 WDR1O75083 606 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 BCAS2O75934 225 aaPredicted RBP9.32□□□□□ -0.92
SF3A3-204ENST00000462258 SNX4O95219 450 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ABCB1P08183 1280 aaPredicted RBP9.32□□□□□ -0.92
SF3A3-204ENST00000462258 SNRPB2P08579 225 aaKnown RBP9.32□□□□□ -0.92
SF3A3-204ENST00000462258 NEFHP12036 1026 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 PRF1P14222 555 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 NAGAP17050 411 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 PRPH2P23942 346 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 NTSP30990 170 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 PTGER4P35408 488 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 NUP107P57740 925 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 DCAF7P61962 342 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ZNF155Q12901 538 aaPredicted RBP9.32□□□□□ -0.92
SF3A3-204ENST00000462258 GXYLT1Q4G148 440 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 WLSQ5T9L3 541 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 KANK2Q63ZY3 851 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 WDR93Q6P2C0 686 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 B3GNT6Q6ZMB0 384 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ACAD11Q709F0 780 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 IKBIPQ70UQ0 350 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 GDF7Q7Z4P5 450 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 PACS2Q86VP3 889 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 MCEMP1Q8IX19 187 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 BANPQ8N9N5 519 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 NEIL3Q8TAT5 605 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FAM76AQ8TAV0 307 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ASB5Q8WWX0 329 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 RND1Q92730 232 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 KAT2AQ92830 837 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 HGDQ93099 445 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 CAVIN3Q969G5 261 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM41AQ96HV5 264 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FAM111AQ96PZ2 611 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 BTBD9Q96Q07 612 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 BBS4Q96RK4 519 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 GATA5Q9BWX5 397 aaPredicted RBP9.32□□□□□ -0.92
SF3A3-204ENST00000462258 OSBPL11Q9BXB4 747 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ANGPTL4Q9BY76 406 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms