RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 NKX2-2O95096 273 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OXSR1O95747 527 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 LINGO3P0C6S8 592 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ALPPL2P10696 532 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 NELFEP18615 380 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 PRKACGP22612 351 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 IGFBP5P24593 272 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 PIGAP37287 484 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OR1E2P47887 323 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 AVPR1BP47901 424 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ALDH3B2P48448 385 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 DHPSP49366 369 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 NR1H2P55055 460 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OR1D5P58170 312 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SMIM11AP58511 58 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OLR1P78380 273 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SHC2P98077 582 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TEKQ02763 1124 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 DUSP8Q13202 625 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TOP3AQ13472 1001 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 LTB4RQ15722 352 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 DEFB110Q30KQ9 67 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 COLEC12Q5KU26 742 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 RBM48Q5RL73 367 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ATAD3BQ5T9A4 648 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TMEM71Q6P5X7 295 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TSPYL5Q86VY4 417 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OR4N5Q8IXE1 308 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 C8orf59Q8N0T1 100 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 LINC00471Q8N535 108 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 CDRT4Q8N9R6 151 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SMYD1Q8NB12 490 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 OR4D11Q8NGI4 311 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 CEP76Q8TAP6 659 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 CYGBQ8WWM9 190 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 NCSTNQ92542 709 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 HDAC2Q92769 488 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 PROX1Q92786 737 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 KAT2AQ92830 837 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 RMND5BQ96G75 393 aaPredicted RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 MUS81Q96NY9 551 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 COL21A1Q96P44 957 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TGM7Q96PF1 710 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SDF2Q99470 211 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ARHGDIGQ99819 225 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 DPYSL5Q9BPU6 564 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 PELOQ9BRX2 385 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 LMF2Q9BU23 707 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF350Q9GZX5 532 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 CXorf21Q9HAI6 301 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 CAPN10Q9HC96 672 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 STARD5Q9NSY2 213 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 TRPC4Q9UBN4 977 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SEC14L3Q9UDX4 400 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 ENOPH1Q9UHY7 261 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 IFT52Q9Y366 437 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 SH3GLB1Q9Y371 365 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 FAM32AQ9Y421 112 aaKnown RBP7.53□□□□□ -1.2
SFPQ-202ENST00000460428 MMACHCQ9Y4U1 282 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 PCDHGA8Q9Y5G5 932 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 KCNE3Q9Y6H6 103 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 U3KQA8 63 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 U3KQV3 271 aa7.53□□□□□ -1.2
SFPQ-202ENST00000460428 A0A087WXM4 84 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 A0A0A6YYC8 382 aaPredicted RBP7.52□□□□□ -1.21
SFPQ-202ENST00000460428 A0A1W2PRQ8 180 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 SYNDIG1LA6NDD5 238 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 ZNF860A6NHJ4 632 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 FAM227AF5H4B4 570 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 I3L1I5 382 aaPredicted RBP7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CLDN4O14493 209 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 PCDHGA12O60330 932 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 MRPS14O60783 128 aaKnown RBP7.52□□□□□ -1.21
SFPQ-202ENST00000460428 LDB3O75112 727 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 COQ9O75208 318 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 GADD45GO95257 159 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CBX7O95931 251 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 ONECUT2O95948 504 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CLPTM1O96005 669 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 THBS1P07996 1170 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CCDC159P0C7I6 412 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 ACP2P11117 423 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 TNFRSF1BP20333 461 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CBLP22681 906 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 ALDH4A1P30038 563 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CSF2RBP32927 897 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 MLLT3P42568 568 aaPredicted RBP7.52□□□□□ -1.21
SFPQ-202ENST00000460428 STT3AP46977 705 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CLK3P49761 638 aaKnown RBP7.52□□□□□ -1.21
SFPQ-202ENST00000460428 HLCSP50747 726 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 PRKAG1P54619 331 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 GABARAPL2P60520 117 aa7.52□□□□□ -1.21
SFPQ-202ENST00000460428 CHRNEQ04844 493 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms