RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 DUSP26Q9BV47 211 aa9.8□□□□□ -0.84
HERC4-207ENST00000460168 SLC19A3Q9BZV2 496 aa9.8□□□□□ -0.84
HERC4-207ENST00000460168 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 DFNA5O60443 496 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ERN1O75460 977 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 B3GALT4O96024 378 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 LAMP1P11279 417 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 HSD17B1P14061 328 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TYRP1P17643 537 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 RPS15AP62244 130 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 LIPEQ05469 1076 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 C2orf80Q0P641 193 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 CHAF1BQ13112 559 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PMS2P3Q13401 168 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TEAD4Q15561 434 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 DEFB133Q30KQ1 61 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SFT2D3Q587I9 215 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TEX30Q5JUR7 227 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SAPCD1Q5SSQ6 148 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERC4-207ENST00000460168 LYSMD4Q5XG99 296 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ARMC6Q6NXE6 501 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SPESP1Q6UW49 350 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 MSANTD1Q6ZTZ1 278 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 R3HCC1LQ7Z5L2 792 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 FLVCR1-AS1Q8TAF5 88 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 CREB3L4Q8TEY5 395 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PTP4A1Q93096 173 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 KCTD14Q9BQ13 255 aaPredicted RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 MACROD1Q9BQ69 325 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 THUMPD3Q9BV44 507 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 SARGQ9BW04 601 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 KCNH6Q9H252 994 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PPA2Q9H2U2 334 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 REEP4Q9H6H4 257 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SPACA1Q9HBV2 294 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 CPNE5Q9HCH3 593 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 MYNNQ9NPC7 610 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SERHLQ9NQF3 203 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 MIEF1Q9NQG6 463 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 FAM120CQ9NX05 1096 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 AP1M2Q9Y6Q5 423 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 MDC1Q14676 2089 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 A0A0G2JN53 185 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 A0A1B0GVT2 93 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 LMO7DNF2Z398 122 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 WRBO00258 174 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ACOT8O14734 319 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ERI3O43414 337 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 HTR3BO95264 441 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 GSNP06396 782 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 RNF224P0DH78 156 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 GNSP15586 552 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 BSGP35613 385 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 RPL3P39023 403 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 SSR2P43308 183 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 FASLGP48023 281 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 GSK3BP49841 420 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 RIDAP52758 137 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 MRPS22P82650 360 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 MC1RQ01726 317 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 BNIP2Q12982 314 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TMEM35AQ53FP2 167 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 YIF1BQ5BJH7 314 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ZMAT1Q5H9K5 638 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 CYP2R1Q6VVX0 501 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 RAB11FIP2Q7L804 512 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 NUP54Q7Z3B4 507 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PAQR7Q86WK9 346 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ARL14Q8N4G2 192 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SLC15A4Q8N697 577 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 MFSD9Q8NBP5 474 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 SLC37A3Q8NCC5 494 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 OR8J3Q8NGG0 315 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 OR52H1Q8NGJ2 320 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERC4-207ENST00000460168 UFD1Q92890 307 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 FCRL4Q96PJ5 515 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TMEM246Q9BRR3 403 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 INPP5KQ9BT40 448 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 TRAF4Q9BUZ4 470 aaPredicted RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 PRMT8Q9NR22 394 aaPredicted RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 TOR4AQ9NXH8 423 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 GMPR2Q9P2T1 348 aaKnown RBP9.79□□□□□ -0.84
HERC4-207ENST00000460168 EGFL7Q9UHF1 273 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 BTBD3Q9Y2F9 522 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 PCDHB14Q9Y5E9 798 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 CORINQ9Y5Q5 1042 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 VPS13AQ96RL7 3174 aa9.79□□□□□ -0.84
HERC4-207ENST00000460168 ZDBF2Q9HCK1 2354 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 TECTAO75443 2155 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 A0A096LPI6 279 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PRSS51A0A1B0GVH4 220 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 OR2A25A4D2G3 310 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 LEUTXA8MZ59 168 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 J3QRK9 145 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 GPR171O14626 319 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 DNAJA2O60884 412 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PPM1BO75688 479 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms