RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MANFP55145 182 aaKnown RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 GPR85P60893 370 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 PDE7AQ13946 482 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 RPS6KA2Q15349 733 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 CES4AQ5XG92 561 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 LYPD8Q6UX82 237 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 NUP54Q7Z3B4 507 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 SLC22A16Q86VW1 577 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 GHDCQ8N2G8 530 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 LIX1Q8N485 282 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 OR2M7Q8NG81 312 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 CEP70Q8NHQ1 597 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 C20orf27Q9GZN8 174 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 NXF5Q9H1B4 397 aaKnown RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 GLIPR2Q9H4G4 154 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 IL1RL2Q9HB29 575 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 DDX18Q9NVP1 670 aaKnown RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 ASIC5Q9NY37 505 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 ATP6V1HQ9UI12 483 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 C19orf53Q9UNZ5 99 aaPredicted RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 OSGIN2Q9Y236 505 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 SMG1Q96Q15 3661 aaKnown RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 NBASA2RRP1 2371 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 A0A1B0GUH1 482 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 FRG2CA6NGY1 282 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 KLF11O14901 512 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 TO15178 435 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 PPM1BO75688 479 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 SNX4O95219 450 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 LBPP18428 481 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 PTGER1P34995 402 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 PPIAP62937 165 aaKnown RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 MRPS22P82650 360 aaKnown RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 ZNHIT3Q15649 155 aaPredicted RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 CPTPQ5TA50 214 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 FBXW8Q8N3Y1 598 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 OR7G2Q8NG99 324 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 CLHC1Q8NHS4 586 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 DIO2Q92813 273 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 ELP4Q96EB1 424 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 SH3GL2Q99962 352 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 C1orf50Q9BV19 199 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 ITPAQ9BY32 194 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 AKTIPQ9H8T0 292 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 C3orf14Q9HBI5 128 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 PNPOQ9NVS9 261 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 MRTO4Q9UKD2 239 aaKnown RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 BOKQ9UMX3 212 aaPredicted RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 SLC5A6Q9Y289 635 aa14.88□□□□□ -0.03
CD28-203ENST00000458610 RP1L1Q8IWN7 2480 aaPredicted RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 HELZ2Q9BYK8 2649 aaKnown RBP14.88□□□□□ -0.03
CD28-203ENST00000458610 SHANK1Q9Y566 2161 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 SCAMP2O15127 329 aaKnown RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 HDAC3O15379 428 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 ABCB7O75027 752 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 SNNO75324 88 aaPredicted RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 ERN1O75460 977 aaKnown RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 CCL3P10147 92 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 ABCD3P28288 659 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 MC3RP41968 323 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 PER3P56645 1201 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 CLDN8P56748 225 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 KCNJ2P63252 427 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 PLCXD2Q0VAA5 305 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 MLC1Q15049 377 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 PRSS53Q2L4Q9 553 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 LSM12Q3MHD2 195 aaKnown RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 TMEM198Q66K66 360 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 TMEM107Q6UX40 140 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 SLC34A3Q8N130 599 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 OR2L13Q8N349 312 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 OR10G3Q8NGC4 313 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 OR5M3Q8NGP4 307 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 SPPL2AQ8TCT8 520 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 TMCO6Q96DC7 493 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 MAGED4Q96JG8 741 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 BTBD9Q96Q07 612 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 NUF2Q9BZD4 464 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 MEAF6Q9HAF1 191 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 FOLH1BQ9HBA9 442 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 SH2D2AQ9NP31 389 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 DEPPQ9NTK1 212 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 GIMAP2Q9UG22 337 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 OR10H1Q9Y4A9 318 aa14.87□□□□□ -0.03
CD28-203ENST00000458610 CHCHD2Q9Y6H1 151 aaPredicted RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.87□□□□□ -0.03
CD28-203ENST00000458610 CLEC18AA5D8T8 446 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 REM1O75628 298 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 ABCB1P08183 1280 aaPredicted RBP14.86□□□□□ -0.03
CD28-203ENST00000458610 STSP08842 583 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 G6PDP11413 515 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 SOX18P35713 384 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 FRKP42685 505 aaPredicted RBP14.86□□□□□ -0.03
CD28-203ENST00000458610 FBXW4P57775 412 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 HSPB3Q12988 150 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 DUSP8Q13202 625 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 EFR3AQ14156 821 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 HYAL4Q2M3T9 481 aa14.86□□□□□ -0.03
CD28-203ENST00000458610 VPS26BQ4G0F5 336 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms