RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 KCNMB2Q9Y691 235 aa8.06□□□□□ -1.12
CLTCL1-204ENST00000458188 AHCTF1Q8WYP5 2266 aa8.06□□□□□ -1.12
CLTCL1-204ENST00000458188 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-204ENST00000458188 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 RNF103-CHMP3A0A140T963 221 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 C2orf92A0A1B0GVN3 265 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 A0A1W2PQ72 361 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 TMEM200CA6NKL6 621 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 B8ZZF3 427 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 K7EM74 188 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PLOD2O00469 737 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 MRASO14807 208 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 EMC8O43402 210 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PLOD3O60568 738 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 ZNF354AO60765 605 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 HMGN2P05204 90 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SERPINA7P05543 415 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 UQCRC2P22695 453 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 GALNSP34059 522 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 CHI3L1P36222 383 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 NR0B1P51843 470 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 CORO7P57737 925 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 ZNF155Q12901 538 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 AIMP2Q13155 320 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 NFYCQ13952 458 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SELPLGQ14242 412 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 LASP1Q14847 261 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 EXT1Q16394 746 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 COX20Q5RI15 118 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 HSDL2Q6YN16 418 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 GALNT10Q86SR1 603 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 MSRB3Q8IXL7 192 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PRR22Q8IZ63 422 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 OR2L13Q8N349 312 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 GALNT16Q8N428 558 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 NATD1Q8N6N6 113 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 FDCSPQ8NFU4 85 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 FBXO27Q8NI29 283 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 RP9Q8TA86 221 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 ZNF675Q8TD23 568 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PSMF1Q92530 271 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PIK3R3Q92569 461 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SLC9A6Q92581 669 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 JADE3Q92613 823 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 RAB8BQ92930 207 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 NACC2Q96BF6 587 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 GIMAP5Q96F15 307 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 VPS50Q96JG6 964 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 IP6K3Q96PC2 410 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 LMF1Q96S06 567 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SLC35A5Q9BS91 424 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SLC25A23Q9BV35 468 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SEMA4CQ9C0C4 833 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 C3orf14Q9HBI5 128 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 ZBTB20Q9HC78 741 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 MMP25Q9NPA2 562 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 GPR83Q9NYM4 423 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 SLC25A37Q9NYZ2 338 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PLA2G3Q9NZ20 509 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 VAPAQ9P0L0 249 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 VPS4AQ9UN37 437 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 C19orf53Q9UNZ5 99 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 KCNE3Q9Y6H6 103 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 PIEZO2Q9H5I5 2752 aa8.05□□□□□ -1.12
CLTCL1-204ENST00000458188 CFAP46Q8IYW2 2715 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 A0A087WV62 115 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 A0A096LPI6 279 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 GXYLT2A0PJZ3 443 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 PCDH17O14917 1159 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 OR2J2O76002 312 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ZFAND5O76080 213 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 UNC5CO95185 931 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 KCNH1O95259 989 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ALPPP05187 535 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ACP2P11117 423 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ICAM2P13598 275 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 MATN1P21941 496 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 PTPN6P29350 595 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ADSLP30566 484 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 GABRA3P34903 492 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 SOX11P35716 441 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 RFX3P48380 749 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 RRADP55042 308 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 UCNP55089 124 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 IRX1P78414 480 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 STX5Q13190 355 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 EBPQ15125 230 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 TERF2Q15554 542 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 MAPRE2Q15555 327 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 CRTC2Q53ET0 693 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 ZNF468Q5VIY5 522 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 HLA-DQA1Q5Y7H0 255 aa8.04□□□□□ -1.12
CLTCL1-204ENST00000458188 TNFAIP8L2Q6P589 184 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms