RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ADAM8P78325 824 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 KEAP1Q14145 624 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 PRICKLE4Q2TBC4 344 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 GGTA1PQ4G0N0 100 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 SLC48A1Q6P1K1 146 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 ANGPTL8Q6UXH0 198 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 PRR22Q8IZ63 422 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 PTGR2Q8N8N7 351 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-220ENST00000458038 OR52B6Q8NGF0 335 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 LCORQ96JN0 433 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-220ENST00000458038 UCN2Q96RP3 112 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 SFXN3Q9BWM7 321 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 OSBPL11Q9BXB4 747 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 MRPL1Q9BYD6 325 aaKnown RBP19.63■□□□□ 0.73
CPNE1-220ENST00000458038 NMRK1Q9NWW6 199 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 CES1P1Q9UKY3 287 aa19.63■□□□□ 0.73
CPNE1-220ENST00000458038 EXO1Q9UQ84 846 aaKnown RBP19.63■□□□□ 0.73
CPNE1-220ENST00000458038 SNPHO15079 494 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 ICOSLGO75144 302 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 TMIGD3P0DMS9 266 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-220ENST00000458038 UAP1Q16222 522 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-220ENST00000458038 DEFB113Q30KQ7 82 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 MILR1Q7Z6M3 343 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 ANP32BQ92688 251 aaKnown RBP19.62■□□□□ 0.73
CPNE1-220ENST00000458038 HGDQ93099 445 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 ISL2Q96A47 359 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 MRRFQ96E11 262 aaKnown RBP19.62■□□□□ 0.73
CPNE1-220ENST00000458038 PHF21BQ96EK2 531 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 DACH2Q96NX9 599 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 CDK15Q96Q40 435 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 BRINP2Q9C0B6 783 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 VPS11Q9H270 941 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 ELOVL6Q9H5J4 265 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 BRF2Q9HAW0 419 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 PRODH2Q9UF12 536 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 BCAP29Q9UHQ4 241 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 ZNF639Q9UID6 485 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 PCTPQ9UKL6 214 aa19.62■□□□□ 0.73
CPNE1-220ENST00000458038 SMIM24O75264 130 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 COL6A2P12110 1019 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 HOXB4P17483 251 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-220ENST00000458038 DRD5P21918 477 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 CHMP24386 653 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 PPICP45877 212 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 MGAT2Q10469 447 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 TRAF3Q13114 568 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 TSNAXIP1Q2TAA8 658 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 DCST1Q5T197 706 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 COMMD6Q7Z4G1 85 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 WNT2BQ93097 391 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 CTHRC1Q96CG8 243 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 OMA1Q96E52 524 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 YIPF4Q9BSR8 244 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 LRRC1Q9BTT6 524 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 FAIM2Q9BWQ8 316 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 PLEKHF2Q9H8W4 249 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 MAT2BQ9NZL9 334 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 KLRF1Q9NZS2 232 aa19.61■□□□□ 0.73
CPNE1-220ENST00000458038 RPH3AQ9Y2J0 694 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-220ENST00000458038 CLCA1A8K7I4 914 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ABCB7O75027 752 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 RCBTB2O95199 551 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ATE1O95260 518 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 OTCP00480 354 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 TRA2BP62995 288 aaKnown RBP19.6■□□□□ 0.73
CPNE1-220ENST00000458038 PSPHP78330 225 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 PLCXD2Q0VAA5 305 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 GAB1Q13480 694 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 TRADDQ15628 312 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ADGRE4PQ86SQ3 457 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 YRDCQ86U90 279 aaKnown RBP19.6■□□□□ 0.73
CPNE1-220ENST00000458038 C9orf106Q8NAJ2 232 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 LINC01560Q8TB33 94 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 TMCO6Q96DC7 493 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ERP27Q96DN0 273 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 RBM24Q9BX46 236 aaKnown RBP19.6■□□□□ 0.73
CPNE1-220ENST00000458038 OR2B2Q9GZK3 357 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 PIGMQ9H3S5 423 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ACSS3Q9H6R3 686 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ZBTB26Q9HCK0 441 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 NEUROD4Q9HD90 331 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 SNX6Q9UNH7 406 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 SLC12A4Q9UP95 1085 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 DTX4Q9Y2E6 619 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 MRPS18CQ9Y3D5 142 aaKnown RBP19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ZNF780BQ9Y6R6 833 aa19.6■□□□□ 0.73
CPNE1-220ENST00000458038 ARID1AO14497 2285 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 TO15178 435 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 ERAL1O75616 437 aaKnown RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 BCAS2O75934 225 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 CASQ1P31415 396 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 FEN1P39748 380 aaKnown RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 AGFG1P52594 562 aaKnown RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 FAM111BQ6SJ93 734 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 ZNF572Q7Z3I7 529 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 BIVMQ86UB2 503 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 PLD6Q8N2A8 252 aaKnown RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 GBP7Q8N8V2 638 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 OR14L1PQ8NHC6 308 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 TM4SF18Q96CE8 201 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms