RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NCF4Q15080 339 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 MED22Q15528 200 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 PRAMEF8Q5VWM4 474 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 PRAMEF7Q5VXH5 474 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 BHLHB9Q6PI77 547 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 CASP12Q6UXS9 341 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 ZER1Q7Z7L7 766 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 TDHQ8IZJ6 230 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 OR56A1Q8NGH5 318 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 OR6T1Q8NGN1 323 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 OR8J1Q8NGP2 316 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 C16orf58Q96GQ5 468 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 CDCA3Q99618 268 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 FNDC11Q9BVV2 318 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 ROGDIQ9GZN7 287 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 LMAN2LQ9H0V9 348 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC6A17Q9H1V8 727 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 FGF22Q9HCT0 170 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 DNAJC27Q9NZQ0 273 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 KLHL20Q9Y2M5 609 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 KCNE3Q9Y6H6 103 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 SNRNP200O75643 2136 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 ARHGAP33O14559 1287 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SCAMP1O15126 338 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 PROM1O43490 865 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 NME6O75414 186 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 FHP07954 510 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 CSNK2A2P19784 350 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 CSTF2P33240 577 aaKnown RBP eCLIP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 TSFMP43897 325 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 ADPRHP54922 357 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 RHAGQ02094 409 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 GNA13Q14344 377 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 CEBPEQ15744 281 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SSX1Q16384 188 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 LINC00471Q8N535 108 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 MORN4Q8NDC4 146 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 FAM83FQ8NEG4 500 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC6A18Q96N87 628 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 C1QTNF7Q9BXJ2 289 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SNX7Q9UNH6 387 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 CCRL2O00421 344 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 ASNA1O43681 348 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 KCNK2O95069 426 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 C8orf89P0DMQ9 161 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 ZNF24P17028 368 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 S100A1P23297 94 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 MMP11P24347 488 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 MAT2AP31153 395 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SF3B4Q15427 424 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■■■□□ 17.2
SEMA3B-209ENST00000456560 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 RNLSQ5VYX0 342 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 OR4K5Q8NGD3 323 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 TMEM80Q96HE8 168 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 PRRC1Q96M27 445 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 OPALINQ96PE5 141 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 PINK1Q9BXM7 581 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 ENTPD4Q9Y227 616 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 UGT2A1Q9Y4X1 527 aa17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 SPTBN5Q9NRC6 3674 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-209ENST00000456560 EMC8O43402 210 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 SPNP16150 400 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 TNNI3P19429 210 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 RAB8AP61006 207 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 RAB30Q15771 203 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 NDUFA9Q16795 377 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC25A30Q5SVS4 291 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 TPRG1LQ5T0D9 272 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 MFSD4BQ5TF39 518 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 C1orf94Q6P1W5 598 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 TMEM107Q6UX40 140 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 HMGN2P46Q86SG4 172 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 PAQR7Q86WK9 346 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 TCEANCQ8N8B7 351 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 IL17RCQ8NAC3 791 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 JPH3Q8WXH2 748 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 ZNF681Q96N22 645 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 GABRG3Q99928 467 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 KLHL3Q9UH77 587 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 MKLN1Q9UL63 735 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 RPL36Q9Y3U8 105 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 HEBP2Q9Y5Z4 205 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 CASC3O15234 703 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 LINC01565O15544 149 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 DNTTP04053 509 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 SCG5P05408 212 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 MAGP20916 626 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 GTF2E2P29084 291 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 ENTPD8Q5MY95 495 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 FAM26EQ8N5C1 309 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 FGF11Q92914 225 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 OR2M4Q96R27 311 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 GPA33Q99795 319 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 POLDIP3Q9BY77 421 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 HHATLQ9HCP6 504 aa17.28■□□□□ 0.36
SEMA3B-209ENST00000456560 COLEC10Q9Y6Z7 277 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms