RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 GPAT4Q86UL3 456 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 MFSD4AQ8N468 514 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 KRTCAP2Q8N6L1 136 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GPR26Q8NDV2 337 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 OR2L5Q8NG80 312 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PROKR1Q8TCW9 393 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF384Q8TF68 577 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PPP1R13LQ8WUF5 828 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CRYGNQ8WXF5 182 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 NDRG1Q92597 394 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 RERGQ96A58 199 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PGAP3Q96FM1 320 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SFXN2Q96NB2 322 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PRRT1Q99946 306 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CPPED1Q9BRF8 314 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 B3GNT4Q9C0J1 378 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 QRSL1Q9H0R6 528 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 NANSQ9NR45 359 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ATG4BQ9Y4P1 393 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 NPFFR2Q9Y5X5 522 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 KDM3BQ7LBC6 1761 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 MED1Q15648 1581 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PARP4Q9UKK3 1724 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 LRP6O75581 1613 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SEPT4O43236 478 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PRAMEF11O60813 436 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZBTB7AO95365 584 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 POP4O95707 220 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ATXN8OSP0DMR3 200 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 DDX6P26196 483 aaKnown RBP eCLIP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 OR1E2P47887 323 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 NCBP2P52298 156 aaKnown RBP eCLIP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ERVPABLB-1P60509 514 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GPR85P60893 370 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CAP1Q01518 475 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF91Q05481 1191 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SLBPQ14493 270 aaKnown RBP eCLIP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 RGNQ15493 299 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SLC14A2Q15849 920 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CRY2Q49AN0 593 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 YIF1BQ5BJH7 314 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 FAM209AQ5JX71 171 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 AWAT2Q6E213 333 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 RDH10Q8IZV5 341 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GPC2Q8N158 579 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF561Q8N587 486 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF366Q8N895 744 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF565Q8N9K5 539 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 OR5T3Q8NGG3 340 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 CASTOR1Q8WTX7 329 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SLC5A11Q8WWX8 675 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SLCO4A1Q96BD0 722 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PKMYT1Q99640 499 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 TMEM43Q9BTV4 400 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 ATG5Q9H1Y0 275 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 OR2S2Q9NQN1 319 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GPRC5BQ9NZH0 403 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 GMPR2Q9P2T1 348 aaKnown RBP4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SLC6A5Q9Y345 797 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 PCDHGC4Q9Y5F7 938 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 COL1A1P02452 1464 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 TRBV2A0A0J9YWF9 115 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 TEX13DA0A0J9YY54 714 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 LINC00862A6NCI5 91 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 RNASET2O00584 256 aaKnown RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 GAPDHSO14556 408 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 OR7A17O14581 309 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 GRM6O15303 877 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 TREHO43280 583 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 LATS1O95835 1130 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 PDYNP01213 254 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 ERCC1P07992 297 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 CSF3P09919 207 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 PYCR1P32322 319 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 RAB13P51153 203 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 CCR8P51685 355 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 CRYZQ08257 329 aaKnown RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 TSSK4Q6SA08 328 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 DCUN1D3Q8IWE4 304 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 CERS5Q8N5B7 392 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 OR4K5Q8NGD3 323 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 CXorf40AQ8TE69 158 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 ZDHHC1Q8WTX9 485 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF419Q96HQ0 510 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 MCHR1Q99705 422 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF649Q9BS31 505 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 NTMT1Q9BV86 223 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 POLDIP3Q9BY77 421 aaKnown RBP4.76□□□□□ -1.65
PCDH9-203ENST00000456367 ASIC5Q9NY37 505 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 SCML1Q9UN30 329 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 SLC22A14Q9Y267 594 aa4.76□□□□□ -1.65
PCDH9-203ENST00000456367 KAT6AQ92794 2004 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms