RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FOLH1BQ9HBA9 442 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 WSB2Q9NYS7 404 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-204ENST00000449510 ZC3H12DA2A288 527 aaKnown RBP11.75□□□□□ -0.53
UBE3B-204ENST00000449510 DRGXA6NNA5 263 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SYN3O14994 580 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SLC35G4P0C7Q5 338 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SSX1Q16384 188 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 MPPE1Q53F39 396 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 HES5Q5TA89 166 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 OR10G6Q8NH81 332 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SLC7A13Q8TCU3 470 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SLC38A5Q8WUX1 472 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 EFCAB11Q9BUY7 163 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF780BQ9Y6R6 833 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 A0A0B4J203 849 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 WASH4PA8MWX3 477 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 CCL16O15467 120 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 PRKRAO75569 313 aaKnown RBP11.75□□□□□ -0.53
UBE3B-204ENST00000449510 NUDT14O95848 222 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 PTPN6P29350 595 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 OR12D2P58182 307 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 CHST9Q7L1S5 443 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 GALNT7Q86SF2 657 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 PCDHGA2Q9Y5H1 932 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 RIIAD1A6NNX1 92 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 LGALS8O00214 317 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 FAAHO00519 579 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 FBXW4P57775 412 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 RING1Q06587 406 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 GPR50Q13585 617 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 BEX5Q5H9J7 111 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 LYPD4Q6UWN0 246 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 GDPD4Q6W3E5 623 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 OR5J2Q8NH18 312 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 SAMD8Q96LT4 415 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 SLC52A3Q9NQ40 469 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TAS2R3Q9NYW6 316 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 MYEF2Q9P2K5 600 aaKnown RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 GNG8Q9UK08 70 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 PCDHGB1Q9Y5G3 927 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 M0QZQ0 153 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ERVH48-1M5A8F1 160 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 LEFTY1O75610 366 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 UCHL1P09936 223 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 FBXO45P0C2W1 286 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 HOXC13P31276 330 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 RPS5P46782 204 aaKnown RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 PIP5KL1Q5T9C9 394 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 LIN54Q6MZP7 749 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM107Q6UX40 140 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 CHAC2Q8WUX2 184 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ASB11Q8WXH4 323 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 KATNB1Q9BVA0 655 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 BTBD1Q9H0C5 482 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ABCG4Q9H172 646 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 RDH14Q9HBH5 336 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 SLC35C2Q9NQQ7 365 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TAS2R10Q9NYW0 307 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 DNMT3BQ9UBC3 853 aaKnown RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM5Q9Y2B1 443 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TBC1D3BA6NDS4 549 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 B8ZZF3 427 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 PI15O43692 258 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 MMP20O60882 483 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TFP02787 698 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ALPPP05187 535 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ZFP36L2P47974 494 aaKnown RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 MGAT3Q09327 533 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 ACBD7Q8N6N7 88 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 MOSPD2Q8NHP6 518 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TFGQ92734 400 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-204ENST00000449510 NDC1Q9BTX1 674 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 TRIM36Q9NQ86 728 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 COPS3Q9UNS2 423 aa11.74□□□□□ -0.53
UBE3B-204ENST00000449510 GABRPO00591 440 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SLC22A5O76082 557 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 PCCBP05166 539 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 C1GALT1C1LP0DN25 315 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 LIPCP11150 499 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 EDNRAP25101 427 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CLCNKAP51800 687 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 WDR5P61964 334 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms