RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CDC73Q6P1J9 531 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 SZRD1Q7Z422 152 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 DTX1Q86Y01 620 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 METTL25Q8N6Q8 603 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 ZNF615Q8N8J6 731 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 ENDOVQ8N8Q3 282 aaKnown RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 CDRT4Q8N9R6 151 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 C11orf65Q8NCR3 313 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 MORN4Q8NDC4 146 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 CT55Q8WUE5 264 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 WDR60Q8WVS4 1066 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 MAGED4Q96JG8 741 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 PCDHAC1Q9H158 963 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 DENND2DQ9H6A0 471 aaPredicted RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 A4GALTQ9NPC4 353 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 PNO1Q9NRX1 252 aaKnown RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 FAF1Q9UNN5 650 aaPredicted RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 USP22Q9UPT9 525 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 ERVK-19Q9WJR5 959 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 PTRH2Q9Y3E5 179 aaKnown RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 SNX13Q9Y5W8 968 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 DCDC2BA2VCK2 349 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 DUXAA6NLW8 204 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 HRKO00198 91 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 RAD1O60671 282 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 IGHEP01854 428 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 NUDT7P0C024 238 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 ARAFP10398 606 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 TCN2P20062 427 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 PCGF2P35227 344 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 EMDP50402 254 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 GPR143P51810 404 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 RPS26P62854 115 aaKnown RBP17.94■□□□□ 0.46
RPS28-202ENST00000449223 EXOSC7Q15024 291 aaKnown RBP17.94■□□□□ 0.46
RPS28-202ENST00000449223 ZNF630Q2M218 657 aaPredicted RBP17.94■□□□□ 0.46
RPS28-202ENST00000449223 GCNT6Q5T4J0 391 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 C1orf146Q5VVC0 180 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 PROSER1Q86XN7 944 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 OR52R1Q8NGF1 315 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 SLC2A12Q8TD20 617 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 ZNF721Q8TF20 911 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 VSTM2LQ96N03 204 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 STACQ99469 402 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 WDR77Q9BQA1 342 aaPredicted RBP17.94■□□□□ 0.46
RPS28-202ENST00000449223 OR51I1Q9H343 314 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 GORASP2Q9H8Y8 452 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 DUSP22Q9NRW4 184 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 TCFL5Q9UL49 500 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 PCDHGA6Q9Y5G7 932 aa17.94■□□□□ 0.46
RPS28-202ENST00000449223 HEMK1Q9Y5R4 338 aaPredicted RBP17.94■□□□□ 0.46
RPS28-202ENST00000449223 SAGE2PA6NJ88 616 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 TTC36A6NLP5 189 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 ARPC2O15144 300 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 AGR2O95994 175 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 TNNI3P19429 210 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 FOLR3P41439 243 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 SLC37A1P57057 533 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 FLOT2Q14254 428 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 MYBPC3Q14896 1274 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 SFT2D3Q587I9 215 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 TNFAIP8L2Q6P589 184 aaPredicted RBP17.93■□□□□ 0.46
RPS28-202ENST00000449223 CPEB2Q7Z5Q1 589 aaKnown RBP17.93■□□□□ 0.46
RPS28-202ENST00000449223 SLC30A8Q8IWU4 369 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 C16orf58Q96GQ5 468 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 LMF2Q9BU23 707 aaKnown RBP17.93■□□□□ 0.46
RPS28-202ENST00000449223 CNPPD1Q9BV87 410 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 SEMA4CQ9C0C4 833 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 OR10A5Q9H207 317 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 PIF1Q9H611 641 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 FARSAQ9Y285 508 aaKnown RBP17.93■□□□□ 0.46
RPS28-202ENST00000449223 TFPTP0C1Z6 253 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 MMP11P24347 488 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 SSTR4P31391 388 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 PGDP52209 483 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 AP1ARQ63HQ0 302 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 HEPHL1Q6MZM0 1159 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 DHFR2Q86XF0 187 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 SLC16A11Q8NCK7 471 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 NFAM1Q8NET5 270 aaPredicted RBP17.93■□□□□ 0.46
RPS28-202ENST00000449223 OR5D16Q8NGK9 328 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 OR1N1Q8NGS0 311 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 OR7D2Q96RA2 312 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 PIGUQ9H490 435 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 EQTNQ9NQ60 294 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 PRODH2Q9UF12 536 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 EGFL7Q9UHF1 273 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 BCAP29Q9UHQ4 241 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 CFL2Q9Y281 166 aa17.93■□□□□ 0.46
RPS28-202ENST00000449223 OR6C76A6NM76 312 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 NKX2-2O95096 273 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 OR12D1P0DN82 309 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 CASP9P55211 416 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 RPS15P62841 145 aaKnown RBP17.92■□□□□ 0.46
RPS28-202ENST00000449223 ELF3P78545 371 aaPredicted RBP17.92■□□□□ 0.46
RPS28-202ENST00000449223 DNASE1L3Q13609 305 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 KPNB1Q14974 876 aaKnown RBP17.92■□□□□ 0.46
RPS28-202ENST00000449223 MTX3Q5HYI7 312 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 PRAMEF8Q5VWM4 474 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 PRAMEF7Q5VXH5 474 aa17.92■□□□□ 0.46
RPS28-202ENST00000449223 CCDC80Q76M96 950 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms