RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NME2P22392 152 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 PPICP45877 212 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 EMDP50402 254 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 C21orf58P58505 322 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF155Q12901 538 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 DUSP8Q13202 625 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 NNATQ16517 81 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 LSM12Q3MHD2 195 aaKnown RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 PRR30Q53SZ7 412 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 RGS9BPQ6ZS82 235 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 SZRD1Q7Z422 152 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ATCAYQ86WG3 371 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 RIMKLAQ8IXN7 391 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF441Q8N8Z8 693 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 GOLM1Q8NBJ4 401 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 SIMC1Q8NDZ2 872 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 GRHL3Q8TE85 626 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 OR5P2Q8WZ92 322 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 COQ8BQ96D53 544 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 SPACA9Q96E40 222 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ZBTB18Q99592 522 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 DUSP26Q9BV47 211 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 BHLHE41Q9C0J9 482 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 C3orf14Q9HBI5 128 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ASF1BQ9NVP2 202 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 C19orf53Q9UNZ5 99 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 DTX4Q9Y2E6 619 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 CROCCQ5TZA2 2017 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 UPK1AO00322 258 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 UBDO15205 165 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 POLR3GO15318 223 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 CFLARO15519 480 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF354AO60765 605 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ERN1O75460 977 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 IFI6P09912 130 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FBXO45P0C2W1 286 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 IDO1P14902 403 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 DRD5P21918 477 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 SOX18P35713 384 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FRKP42685 505 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 PRKAG1P54619 331 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 NME5P56597 212 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 PSPHP78330 225 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 MLC1Q15049 377 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNHIT3Q15649 155 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 DPY19L1Q2PZI1 675 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FHL5Q5TD97 284 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 MAVSQ7Z434 540 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 CAMKMTQ7Z624 323 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF227Q86WZ6 799 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 OR2L13Q8N349 312 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 PSD4Q8NDX1 1056 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 DNAJB8Q8NHS0 232 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 HSPBAP1Q96EW2 488 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 NXF5Q9H1B4 397 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FOLH1BQ9HBA9 442 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 OLAHQ9NV23 265 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 AIG1Q9NVV5 245 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 SNX8Q9Y5X2 465 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 SPENQ96T58 3664 aaKnown RBP12.94□□□□□ -0.34
GTF3C3-206ENST00000448539 FRG2CA6NGY1 282 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF195O14628 629 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 TP53I11O14683 189 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 EMC8O43402 210 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 PEX1O43933 1283 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 ABCD3P28288 659 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 S100A3P33764 101 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 KRT20P35900 424 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 KIR3DL1P43629 444 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 CDK9P50750 372 aaKnown RBP12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 AQP5P55064 265 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 PRR5P85299 388 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 PLCXD2Q0VAA5 305 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 GSTA3Q16772 222 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 SPDYE7PQ495Y7 208 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC22A10Q63ZE4 541 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 PRR22Q8IZ63 422 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms